diff --git a/main_custom.py b/main_custom.py index 340bd9843a47c43ebc76e133cc91afef86124be7..1f1d51e3b9487ee450321292b650762da4baf28f 100644 --- a/main_custom.py +++ b/main_custom.py @@ -266,12 +266,12 @@ def save_pred(model, data_val, forward, output_path): charges.extend(charge.data.cpu().tolist()) true_rt.extend(rt.data.cpu().tolist()) true_int.extend(intensity.data.cpu().tolist()) - data_frame['rt pred'] = pred_rt - data_frame['seq'] = seqs - data_frame['pred int'] = pred_int - data_frame['true rt'] = true_rt - data_frame['true int'] = true_int - data_frame['charge'] = charges + data_frame['rt pred'] = pred_rt + data_frame['seq'] = seqs + data_frame['pred int'] = pred_int + data_frame['true rt'] = true_rt + data_frame['true int'] = true_int + data_frame['charge'] = charges @@ -285,9 +285,9 @@ def save_pred(model, data_val, forward, output_path): pred_rt.extend(pr_rt.data.cpu().tolist()) seqs.extend(seq.data.cpu().tolist()) true_rt.extend(rt.data.cpu().tolist()) - data_frame['rt pred'] = pred_rt - data_frame['seq'] = seqs - data_frame['true rt'] = true_rt + data_frame['rt pred'] = pred_rt + data_frame['seq'] = seqs + data_frame['true rt'] = true_rt if forward == 'int': #adapted to prosit dataset format @@ -300,10 +300,10 @@ def save_pred(model, data_val, forward, output_path): seqs.extend(seq.data.cpu().tolist()) charges.extend(charge.data.cpu().tolist()) true_int.extend(intensity.data.cpu().tolist()) - data_frame['seq'] = seqs - data_frame['pred int'] = pred_int - data_frame['true int'] = true_int - data_frame['charge'] = charges + data_frame['seq'] = seqs + data_frame['pred int'] = pred_int + data_frame['true int'] = true_int + data_frame['charge'] = charges data_frame.to_csv(output_path)