diff --git a/alignement.py b/alignement.py index c74f2998607d145ac42e2636ddac6763ddee80ae..de60fb17c523a34b0bda39852a4700e9ddf62cc9 100644 --- a/alignement.py +++ b/alignement.py @@ -183,14 +183,14 @@ def compare_include_df(df, sub_df, save = True, path = 'temp.png'): # dataset_train.to_pickle('database/data_DIA_ISA_55_test.pkl') # data_train_1 = pd.read_pickle('database/data_DIA_ISA_55_test_30_01.pkl').reset_index(drop=True) -data_train_2 = pd.read_pickle('database/data_DIA_ISA_55_train_30_01.pkl').reset_index(drop=True) -data_ori = pd.read_csv('database/data_train.csv').reset_index(drop=True) -data_ori['Sequence']=data_ori['sequence'] -data_ori['Retention time']=data_ori['irt'] +# data_train_2 = pd.read_pickle('database/data_DIA_ISA_55_train_30_01.pkl').reset_index(drop=True) +# data_ori = pd.read_csv('database/data_train.csv').reset_index(drop=True) +# data_ori['Sequence']=data_ori['sequence'] +# data_ori['Retention time']=data_ori['irt'] # data_train = pd.concat([data_train_2,data_train_1]).reset_index(drop=True) -data_align = align(data_train_2, data_ori) - -data_align.to_pickle('database/data_ISA_dual_align_train.pkl') +# data_align = align(data_train_2, data_ori) +# +# data_align.to_pickle('database/data_ISA_dual_align_train.pkl') #compare DIANN pred to DIA mesures diff --git a/database/data_ISA_dual_align_train.pkl b/database/data_ISA_dual_align_train.pkl new file mode 100644 index 0000000000000000000000000000000000000000..a9a32a4a9bd1f4cbdff4d8c171fcee88d037603c Binary files /dev/null and b/database/data_ISA_dual_align_train.pkl differ