diff --git a/model_custom.py b/model_custom.py index e4601b37bf9298561fd7d2606d93c2d9f9185e78..7f8a7d107d9091b5250354416087737799061f97 100644 --- a/model_custom.py +++ b/model_custom.py @@ -101,22 +101,14 @@ class Model_Common_Transformer(nn.Module): d_model=self.embedding_dim) def forward(self, seq, charge): - print('seq', seq.size()) - print('charge', charge.size()) meta_ohe = torch.nn.functional.one_hot(charge - 1, self.charge_max).float() - print('meta_ohe', meta_ohe.size()) seq_emb = torch.nn.functional.one_hot(seq, self.nb_aa).float() - print('seq_emb', seq_emb.size()) emb = self.pos_embedding(self.emb(seq_emb)) - print('emb', emb.size()) meta_enc = self.meta_enc(meta_ohe) - print('meta_enc', meta_enc.size()) + print('emb', emb) enc = self.encoder(emb) - print('enc', enc.size()) out_rt = self.decoder_RT(enc) - print('out_rt', out_rt.size()) int_enc = torch.mul(enc, meta_enc) - print('out_rt', out_rt.size()) out_int = self.decoder_int(int_enc) return out_rt.flatten(), out_int