From f48bf1f27eed9c75d7278e12b09f9cec8235505e Mon Sep 17 00:00:00 2001
From: Schneider Leo <leo.schneider@etu.ec-lyon.fr>
Date: Thu, 10 Oct 2024 17:36:40 +0200
Subject: [PATCH] selection colomn invariant prosit data
---
alignement.py | 6 +++---
database/data_ISA_augmented_1.csv | 2 +-
database/data_ISA_augmented_2.csv | 2 +-
database/data_ISA_augmented_3.csv | 2 +-
4 files changed, 6 insertions(+), 6 deletions(-)
diff --git a/alignement.py b/alignement.py
index b2d01b4..8e4aa51 100644
--- a/alignement.py
+++ b/alignement.py
@@ -224,16 +224,16 @@ df_3 = pd.read_pickle('database/data_prosit_threshold_3.pkl')
df_3['Sequence']= df_3['Sequence'].map(numerical_to_alphabetical_str)
df_augmented_1 = pd.concat([df_1,df_base],axis=0).reset_index(drop=True)
-df_augmented_1.columns=['sequence','retention_time']
+df_augmented_1.columns=['sequence','irt']
df_augmented_1['state']='train'
df_augmented_1.to_csv('database/data_ISA_augmented_1.csv')
df_augmented_2 = pd.concat([df_2,df_base],axis=0).reset_index(drop=True)
-df_augmented_2.columns=['sequence','retention_time']
+df_augmented_2.columns=['sequence','irt']
df_augmented_2['state']='train'
df_augmented_2.to_csv('database/data_ISA_augmented_2.csv')
df_augmented_3 = pd.concat([df_3,df_base],axis=0).reset_index(drop=True)
-df_augmented_3.columns=['sequence','retention_time']
+df_augmented_3.columns=['sequence','irt']
df_augmented_3['state']='train'
df_augmented_3.to_csv('database/data_ISA_augmented_3.csv')
\ No newline at end of file
diff --git a/database/data_ISA_augmented_1.csv b/database/data_ISA_augmented_1.csv
index a14cc90..6462588 100644
--- a/database/data_ISA_augmented_1.csv
+++ b/database/data_ISA_augmented_1.csv
@@ -1,4 +1,4 @@
-,sequence,retention_time,state
+,sequence,irt,state
0,QLAPPYSGR,26.43134307861328,train
1,NQSLTLIELLK,139.01040649414062,train
2,GYELLFQPEVVR,118.29725646972656,train
diff --git a/database/data_ISA_augmented_2.csv b/database/data_ISA_augmented_2.csv
index cd7e789..3bbb602 100644
--- a/database/data_ISA_augmented_2.csv
+++ b/database/data_ISA_augmented_2.csv
@@ -1,4 +1,4 @@
-,sequence,retention_time,state
+,sequence,irt,state
0,NTASHTAAAARTQAPPTPDK,-10.377433776855469,train
1,QLAPPYSGR,26.43134307861328,train
2,ELATWTPTEFR,92.1288604736328,train
diff --git a/database/data_ISA_augmented_3.csv b/database/data_ISA_augmented_3.csv
index 9dde843..fb7f667 100644
--- a/database/data_ISA_augmented_3.csv
+++ b/database/data_ISA_augmented_3.csv
@@ -1,4 +1,4 @@
-,sequence,retention_time,state
+,sequence,irt,state
0,GSTDDGFIILK,96.57299041748048,train
1,LYTGAGYDEVK,34.17017364501953,train
2,NTASHTAAAARTQAPPTPDK,-10.377433776855469,train
--
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