From 7db0c0c56e06c59ac31d8b50b8081537f3f3d076 Mon Sep 17 00:00:00 2001
From: Schneider Leo <leo.schneider@etu.ec-lyon.fr>
Date: Thu, 13 Feb 2025 14:49:57 +0100
Subject: [PATCH] df oktoberfest
---
data/msp_file_extraction.py | 20 ++++++++++----------
1 file changed, 10 insertions(+), 10 deletions(-)
diff --git a/data/msp_file_extraction.py b/data/msp_file_extraction.py
index 79fde95..c27be7a 100644
--- a/data/msp_file_extraction.py
+++ b/data/msp_file_extraction.py
@@ -70,16 +70,16 @@ if __name__ == '__main__':
df['state'] = 'holdout'
df.to_csv('spectral_lib/df_predicted_library_oktoberfest.csv',index=False)
#
- # updated_content=[]
- # ind=0
- # predicted_lib=pd.read_csv('../output/out_lib_oktoberfest.csv')
- #
- # predicted_lib['seq'] = predicted_lib['seq'].map(numerical_to_alphabetical_str)
- #
- # predicted_lib['sequence']=predicted_lib['seq']
- # pred_rt=predicted_lib['rt pred']
- #
- # df_joined = pd.merge(df,predicted_lib[['rt pred','sequence']],on='sequence',how='left')
+ updated_content=[]
+ ind=0
+ predicted_lib=pd.read_csv('../output/out_lib_oktoberfest.csv')
+
+ predicted_lib['seq'] = predicted_lib['seq'].map(numerical_to_alphabetical_str)
+
+ predicted_lib['sequence']=predicted_lib['seq']
+ pred_rt=predicted_lib['rt pred']
+
+ df_joined = pd.merge(df,predicted_lib[['rt pred','sequence']],on='sequence',how='left')
#1787661 avec C , 15104040 sans
\ No newline at end of file
--
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