diff --git a/image_ref/fasta/optimal peptide set/Citrobacter amalonaticus.fasta b/image_ref/fasta/optimal peptide set/Citrobacter amalonaticus.fasta new file mode 100644 index 0000000000000000000000000000000000000000..c3bfa1d28dd3c55f9a0c109ec840d4cecea4b368 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Citrobacter amalonaticus.fasta @@ -0,0 +1,527 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +FPAIIYGGK +EAPIAIELDHDSIMNMQAK +EGFYSDVLTIVVDGK +LTHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGYYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEYFEAR +LADVLAAANAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVNFQVHSEVFAK +LTINVVAE +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEYFEAR +LADVLAAANAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVDFQVHSEVFAK +LTINVVAE +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEYFEAR +LADVLAAANAR +INALETVTITSK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVDFQVHSEVFAK +LTINVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YSAAITGAEGK +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLANAVK +SYGAPTITK +EIELADAFENMGAQMVK +AVAAGMNPMDLK +SLSKPSSTSK +DLLPVLEGVAK +ENTTIIDGAGEGAGIEAR +AQIEETSSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGIVPGGGVALIR +GVNEDQNHGIQIALR +EIVTNAGDEPSVILNR +DEPAMPAGGGMGGMGGMDF +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGDEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +MSNIKPLHDR +LSAGGIVIPDSATEKPIK +GEVVAVGTGK +VLDNGQVR +LDGVELLVVK +EDDLFAILG +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGADVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +LGDLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQTYNADR +DILGAPVGDTLTQAR +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDEEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDMGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPNNVAQAVIEAR +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFVNDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDMGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DGGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +IASLEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +LATELAIR +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAAGADVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLAEQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLAEQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQISNIAIFNAATGK +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQISNIALFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLASDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQMGNER +VTVQSLDVVR +IFTEDGVSIPVTVIEVEANR +DLASDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQMGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +INGQVITIK +TLNDAVEVK +HADNALTFGPR +DGYVDGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGIGK +AILAAAGIAENVK +ISELSEGQIDTLR +FVVEGDLR +AIISDVNASDEDR +QTGRPHGYVGK +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVTDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Citrobacter amalonaticus.parquet b/image_ref/fasta/optimal peptide set/Citrobacter amalonaticus.parquet new file mode 100644 index 0000000000000000000000000000000000000000..838118ea534033c53810cc71e040300df66186ae Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Citrobacter amalonaticus.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Citrobacter braakii.fasta b/image_ref/fasta/optimal peptide set/Citrobacter braakii.fasta new file mode 100644 index 0000000000000000000000000000000000000000..014427b6286e23fa52a82e4b038b1754a8393971 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Citrobacter braakii.fasta @@ -0,0 +1,418 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +AEFYSEVLTIVVDGK +LAHIDFVR +FGGETVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIETVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +TSGEQHLR +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLSAAEAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVSFQVHSEVFAK +LTVNVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTAAITGAEGTIHR +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGDEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTIIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGSDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQVYNADR +DILGAPVGDTLTQAR +NPADKPLPGFK +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDEEPFAALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTILNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +SGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +ASYSMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +VASLEGEVLGNYQHGAR +IGVLVAATGADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMDPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +VASLEGEVLGNYQHGAR +IGVLVAATGADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELITASNIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGSDIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +LASELALR +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +QATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAQGTDVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLAEQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQISNLAIFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLVEK +DGIPAVVER +SANIALVLYK +AGDQVQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +LIVVESFSVEAPK +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVIPAGVDVK +INGQVITIK +TLNDAVAVNHADNALTFGPR +DGYADGWAQAGTAR +ALLNAMVVGVTEGFTK +LQLVGVGYR +QLIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAEDVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGYVGK +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVTLYLGAVATTVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLGLLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNHGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVR +AYGSTNPINVVR +ATIDGLENMK +SPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +DGLEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGMGIAVVSTSK +MAENQYYGTGR +VFIKPGSGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Citrobacter braakii.parquet b/image_ref/fasta/optimal peptide set/Citrobacter braakii.parquet new file mode 100644 index 0000000000000000000000000000000000000000..1e13eea509514802330b133d0c13d1b31948b213 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Citrobacter braakii.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Citrobacter cronae.fasta b/image_ref/fasta/optimal peptide set/Citrobacter cronae.fasta new file mode 100644 index 0000000000000000000000000000000000000000..da3a41087d0a77d26c2fcd8794fdcaad4383ee2e --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Citrobacter cronae.fasta @@ -0,0 +1,471 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTIR +IGVPFVDGGVIK +AEVVAHGR +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +AEFYSEVLTIVVDGK +LTHIDFVR +FGGETVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIETVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +TSGEQHLR +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLSAAEAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVSFQVHSEVFAK +LTVNVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPLVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTAAITGAEGTIHR +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGDEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIASQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTIIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGSDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTIIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGSDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQVYNADR +DILGAPVGDTLTSAR +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFAALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTILNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +SGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +ASYSMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +VASLEGEVLGNYQHGAR +IGVLVAATGADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELITASNIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGSDIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +LASELALR +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +QATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +LEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAAGADVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +LIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLVEK +DGIPAIVER +SANIALVLYK +AGDQVQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APIVIPAGVDVK +INGQVITIK +TLNDAVAVNHADNALTFGPR +DGYADGWAQAGTAR +ALLNAMVVGVTEGFTK +LQLVGVGYR +QLIGQVAADLR +APVVIPAGVDVK +INGQVITIK +TLNDAVAVNHADNALTFGPR +DGYADGWAQAGTAR +ALLNAMVVGVTEGFTK +LQLVGVGYR +QLIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAEDVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGYVGK +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVTLYLGAVATTVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLGLLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNHGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVR +AYGSTNPINVVR +ATIDGLENMK +SPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +NELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGMGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Citrobacter cronae.parquet b/image_ref/fasta/optimal peptide set/Citrobacter cronae.parquet new file mode 100644 index 0000000000000000000000000000000000000000..f2ab6d98ec10368e1ac8a542f963709345d9c4d7 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Citrobacter cronae.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Citrobacter farmeri.fasta b/image_ref/fasta/optimal peptide set/Citrobacter farmeri.fasta new file mode 100644 index 0000000000000000000000000000000000000000..43294a4e4a75826c2b15ea0b34a9c4b12af5420c --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Citrobacter farmeri.fasta @@ -0,0 +1,501 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSITVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +FPAIIYGGK +EAPIAIELDHDAIMNMQAK +EGFYSDVLTIVVDGK +LTHIDFVR +MFTINAEVR +FPAIIYGGK +EAPIAIELDHDSIMNMQAK +EGFYSDVLTIVVDGK +LTHIDFVR +FGGESVLAGSIIVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIETVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGYYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVLNSLR +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEYFEAR +LADVLAAANAR +INALETVTITSK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHVVDFQVHSEVFAK +LTINVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YSAAITGAEGK +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGDEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +ELLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGDEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +MSNIKPLHDR +LSAGGIVIPDSATEKPIK +GEVVAVGTGK +VLDNGQVR +LDGVELLVVK +EDDLFAILG +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IHAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGADVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +LGDLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQTYNADR +DILGAPVGDTLTQAR +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQTYNADR +DILGAPVGDTLTQAR +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDEEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDMGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DGGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +IASLEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAAGADVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQISNIALFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +INGQVITIK +TLNDAVEVK +HADNALTFGPR +DGYVDGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGIGK +AILAAAGIAENVK +ISELSEGQIDTLR +FVVEGDLR +AIISDVNASDEDR +QTGRPHGYVGK +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVTDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNDALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Citrobacter farmeri.parquet b/image_ref/fasta/optimal peptide set/Citrobacter farmeri.parquet new file mode 100644 index 0000000000000000000000000000000000000000..88d47ba0fc800343d44c42414ca2ea574b0f89d8 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Citrobacter farmeri.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Citrobacter freundii.fasta b/image_ref/fasta/optimal peptide set/Citrobacter freundii.fasta new file mode 100644 index 0000000000000000000000000000000000000000..5496b0b3fc2cb4a79194e3c860ba34d911e80a98 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Citrobacter freundii.fasta @@ -0,0 +1,444 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +AEFYSEVLTIVVDGK +LSHIDFVR +FGGETVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIETVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +TSGEQHLR +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLSAAEAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVSFQVHSEVFAK +LTVNVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTAAITGAEGTIHR +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGDEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +GVNVLANAVK +SYGAPTITK +EIELADAFENMGAQMVK +AVAAGMNPMDLK +SLSKPSSTSK +DLLPVLEGVAK +ENTTIIDGAGEGAGIEAR +AQIEETSSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGIVPGGGVALIR +GVNEDQNHGIQIALR +EIVTNAGDEPSVILNR +DEPAMPAGGGMGGMGGMDF +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MSNIKPLHDR +LSAGGIVIPDSATEKPIK +GEVVAVGTGK +VLDNGQVR +LDGVELLVVK +EDDLFAILG +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTIIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGSDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQVYNADR +DILGAPVGDTLTQAR +NPADKPLPGFK +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFAALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTILNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +SGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +ASYSMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +VASLEGEVLGNYQHGAR +IGVLVAATGADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPSR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IVELAGYLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGSDIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +LASELALR +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +QATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAAGADVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLESLLVALK +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLESLLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQISNLAIFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLVEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +LIVVESFSVEAPK +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVIPAGVDVK +INGQVITIK +TLNDAVAVNHADNALTFGPR +DGYADGWAQAGTAR +ALLNAMVVGVTEGFTK +LQLVGVGYR +QLIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAEDVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGYVGK +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVTLYLGAVATTVR +SQDLASQAEESFVEAE +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVTLYLGAVATTVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLGLLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNHGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVR +AYGSTNPINVVR +ATIDGLENMK +SPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +NELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGMGIAVVSTSK +MAENQYYGTGR +VFIKPGSGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Citrobacter freundii.parquet b/image_ref/fasta/optimal peptide set/Citrobacter freundii.parquet new file mode 100644 index 0000000000000000000000000000000000000000..39e373d5a96a23589172abcd3b54c50053c8b870 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Citrobacter freundii.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Citrobacter koseri.fasta b/image_ref/fasta/optimal peptide set/Citrobacter koseri.fasta new file mode 100644 index 0000000000000000000000000000000000000000..07e376df7bb8c81688f240321c457684a119e24d --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Citrobacter koseri.fasta @@ -0,0 +1,407 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +AEFYSEVLTIVVDGK +LTHIDFVR +FGGETVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIETVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGYYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAANAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVNFQVHSEVFAK +LTVNVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTGAITGAEGK +QLAYPINK +HAVTEASPMVK +DDFANETADDADAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +STLEDLGQAK +DTTTIIDGVGEESAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIISESDILAIVEA +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALQYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIDVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IHAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGADVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +LGDLPTSGQITLFDGR +SVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVQDVLER +VMSTGQVYNADR +DIHGAPVGDTLTLAR +EIIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDIGIR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPSNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVDVLK +IGENINIR +VASLEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGYLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGYLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGTIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +LATELALR +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +QATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAQGTDVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLAEQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNIAIFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +INGQVITIK +TLNDAVEVK +HADNALTFGPR +DGYVDGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAENVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNASDEDR +QTGRPHGYVGK +MSLSVEAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVTDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELTDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Citrobacter koseri.parquet b/image_ref/fasta/optimal peptide set/Citrobacter koseri.parquet new file mode 100644 index 0000000000000000000000000000000000000000..e63b5783ea96fddacbdf4f929738b1009a3b2c72 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Citrobacter koseri.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Citrobacter portucalensis.fasta b/image_ref/fasta/optimal peptide set/Citrobacter portucalensis.fasta new file mode 100644 index 0000000000000000000000000000000000000000..27c036a556cc2eeedf3c13aa7fe305f339f93ba1 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Citrobacter portucalensis.fasta @@ -0,0 +1,409 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +AEFYSEVLTIVVDGK +LSHIDFVR +FGGETVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIETVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +TSGEQHLR +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLSAAEAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVSFQVHSEVFAK +LTVNVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTAAITGAEGTIHR +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGDEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +GVNVLANAVK +SYGAPTITK +EIELADAFENMGAQMVK +AVAAGMNPMDLK +SLSKPSSTSK +DLLPVLEGVAK +ENTTIIDGAGEGAGIEAR +AQIEETSSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGIVPGGGVALIR +GVNEDQNHGIQIALR +EIVTNAGDEPSVILNR +DEPAMPAGGGMGGMGGMDF +MSNIKPLHDR +LSAGGIVIPDSATEKPIK +GEVVAVGTGK +VLDNGQVR +LDGVELLVVK +EDDLFAILG +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTIIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGSDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQVYNADR +DILGAPVGDTLTQAR +NPADKPLPGFK +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFAALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTILNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +SGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +ASYSMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +VASLEGEVLGNYQHGAR +IGVLVAATGADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGSDIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +LASELALR +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +QATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAAGADVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLESLLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQISNLAIFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLVEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +LIVVESFSVEAPK +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVIPAGVDVK +INGQVITIK +TLNDAVAVNHADNALTFGPR +DGYADGWAQAGTAR +ALLNAMVVGVTEGFTK +LQLVGVGYR +QLIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAEDVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGYVGK +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVTLYLGAVATTVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLGLLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNHGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVR +AYGSTNPINVVR +ATIDGLENMK +SPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +NELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGMGIAVVSTSK +MAENQYYGTGR +VFIKPGSGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Citrobacter portucalensis.parquet b/image_ref/fasta/optimal peptide set/Citrobacter portucalensis.parquet new file mode 100644 index 0000000000000000000000000000000000000000..dabd7eba6581a361099032bb16d2ea2fdc5b79a4 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Citrobacter portucalensis.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Enterobacter asburiae.fasta b/image_ref/fasta/optimal peptide set/Enterobacter asburiae.fasta new file mode 100644 index 0000000000000000000000000000000000000000..9172784c04c813049aff8b79d9cea230a1843d52 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Enterobacter asburiae.fasta @@ -0,0 +1,749 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTIEAEVR +AEFYSEVLTIVVGGK +LTHIDFVR +MFTIEAEVR +AEFYSEVLTIVVGGK +LSHIDFVR +MFTIEAEVR +AEFYSEVLTIVVGGK +LTHIDFVR +MFTIEAEVR +AEFYSEVLTIAVGGK +LTHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAANAR +AEAINALGTVTIASK +LFGSIGTR +DIADAVTAAGVK +TTGEHEVDFQVHSEVFAK +LVVNVVAE +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAANAR +AEAINALGTVTIASK +LFGSIGTR +DIADAVSAAGVK +TTGEHEVDFQVHSEVFAK +LVVNVVAE +RPFYQVVVTDSR +VGFFNPLAAGAEEETR +IAHWVGQGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AAAQNAFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YSAAITGAEGTIHR +QLAYPINK +NAVTEASPMVK +DDFANETADDSDAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVASAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANNVK +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVTAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVTNNVK +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVASAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANNVK +MSIRPLHDR +SAGGIVLTGSAAAK +GEIIAVGK +ILENGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEADGK +HIEVPVEYIAGK +IETLFTNDLDHGAYISETIR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALQYTTEQILDLFFEK +LQMELVPER +GETASFDIEADGK +LIEVPVEYIAGK +IETLFTNDLDHGAYISETIR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALQYTTEQILDLFFEK +LQMELVPER +GETASFDIEADGK +LIEVPVEYIAGK +IETLFTNDLDHGAYISETIR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK 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+TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPFIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPFIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVQR +DWYVVDATGK +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEIR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVSTPVTVR +AAIEAAGGK +GLAQGTDVSFGTFGLK +VFPDKPITEKPLEVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +EAFGLAAAK +DAAAAVGK +GISNVSFDR +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +LVVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNAATGK +SVEELNAELLNLLR +MQAASGQLQQTHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVYFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVIPAGVDVK +IDGQVITIK +HADNALTFGPR +DGFVDGWAQAGTAR +ALLNSMVVGVTEGFTK +LQLVGVGYR +QLIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAEDVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNASDEDR +QTGRPHGYVGK +MSLSVEAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVTDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFDK +LENSLGGIK +AVSLYLSAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVK +ANDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +FGSELLAK +FVNILMVDGK +STAEAIVYSALETLAQR +NELEAFEVALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAADNK +MSMQDPIADMLTR +VAVTMPSAK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGSGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Enterobacter asburiae.parquet b/image_ref/fasta/optimal peptide set/Enterobacter asburiae.parquet new file mode 100644 index 0000000000000000000000000000000000000000..4362e2414327702081f2bf1a6adb2a96e60520eb Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Enterobacter asburiae.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Enterobacter chengduensis.fasta b/image_ref/fasta/optimal peptide set/Enterobacter chengduensis.fasta new file mode 100644 index 0000000000000000000000000000000000000000..da4b0a272e92f244b4a0d1aff7042ad456f34800 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Enterobacter chengduensis.fasta @@ -0,0 +1,623 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTIEAEVR +AEFYSEVLTIVVGGK +LTHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAANAR +AEAINALGTVTIASK +LFGSIGTR +DIADAVTAAGVK +TTGEHEVDFQVHSEVFAK +LVVNVVAE +RPFYQVVVTDSR +VGFFNPLAAGAEEETR +IAHWVGQGATVSDR +RPFYQVVVTDSR +VGFFNPLAAGAEEETR +IAHWVGQGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AAAQNAFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YSAAITGAEGTIHR +QLAYPINK +NAVTEASPMVK +DDFANETADDSDAGDSEE +YTGAITAAAGTIHR +QLAYPINK +HAVTEASPMVK +DDFANETADDSDAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVASAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANK +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVASAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANNVK +MSIRPLHDR +SAGGIVLTGSAAAK +GEIIAVGK +ILENGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MSNIKPLHDR +LSAGGIVIPDSATEKPIK +GEVVAVGTGK +VLDNGQVR +LDGVELLVVK +EDDLFAILG +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALQYTTEQILDLFFEK +LQMELVPER +GETASFDIEADGK +LIEVPVEYIAGK +IETLFTNDLDHGAYISETLR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEADGK +HIEVPVEYIAGK +IETLFTNDLDHGAYISETIR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE 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set/Enterobacter chengduensis.parquet b/image_ref/fasta/optimal peptide set/Enterobacter chengduensis.parquet new file mode 100644 index 0000000000000000000000000000000000000000..dd30d25ab44535b402930d5f831872ef0b239a59 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Enterobacter chengduensis.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Enterobacter cloacae.fasta b/image_ref/fasta/optimal peptide set/Enterobacter cloacae.fasta new file mode 100644 index 0000000000000000000000000000000000000000..64f74eedeba98e7146d1096c7d1938b13a8b33e1 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Enterobacter cloacae.fasta @@ -0,0 +1,667 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK 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b/image_ref/fasta/optimal peptide set/Enterobacter hormaechei.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Enterobacter kobei.fasta b/image_ref/fasta/optimal peptide set/Enterobacter kobei.fasta new file mode 100644 index 0000000000000000000000000000000000000000..6de98eb669a7d2e5ae884a412ab50fd04dd75506 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Enterobacter kobei.fasta @@ -0,0 +1,497 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTIEAEVR +AEFYSEVLTIVVGGK +LTHIDFVR +MFTIEAEVR +AEFYSEVLTIVVGGK +LTHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAANAR +AEAINALGTVTIASK +LFGSIGTR 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+GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVQR +DWYVVDATGK +AEYTPHVDTGDYIIVLNADK +MYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEIR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILSGEVSTPVTVR +AAIEAAGGK +GLAQGTDVSFGTFGLK +VFPDKPITEKPLEVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +EAFGLAAAK +DAAAAVGK +GISNVSFDR +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +LVVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNAATGK +SVEELNAELLNLLR +MQAASGQLQQTHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVYFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVIPAGVDVK +IDGQVITIK +HADNALTFGPR +DGFVDGWAQAGTAR +ALLNSMVVGVTEGFTK +LQLVGVGYR +QLIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAEDVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNASDEDR +QTGRPHGYVGK +MSLSVEAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVTDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFDK +LENSLGGIK +AVSLYLSAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVK +ANDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +FGSELLAK +FVNILMVDGK +STAEAIVYSALETLAQR +NELEAFEVALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +VAVTMPSAK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGSGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Enterobacter kobei.parquet b/image_ref/fasta/optimal peptide set/Enterobacter kobei.parquet new file mode 100644 index 0000000000000000000000000000000000000000..21c114675883377fe7fa43ce1235a18c0a0f58cb Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Enterobacter kobei.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Escherichia coli.fasta b/image_ref/fasta/optimal peptide set/Escherichia coli.fasta new file mode 100644 index 0000000000000000000000000000000000000000..d553b2f439f4e75e33d08591f271312af6bd513a --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Escherichia coli.fasta @@ -0,0 +1,508 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +ALEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSISVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +FPAIIYGGK +EAPLAVELDHDK +AEFYSEVLTIVVDGK +LLHIDFVR +MFTINAEVR +FPAIIYGGK +EAPLAIELDHDK +AEFYSEVLTIVVDGK +LQHIDFVR +MFTINAEVR +FPAIIYGGK +EAPLAIELDHDK +AEFYSEVLTIVVDGK +LQHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLAELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGYYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NIEFFEAR +LAEVLAAANAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +TTGEHEVSFQVHSEVFAK +VIVNVVAE +RPFYQVVVADSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTAAITGAEGK +QLAYPINK +HAVTEASPMVK +DDFANETADDADAGDSEE +YTAAITGAEGK +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVTAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +MNIRPLHDR +SAGGIVLTGSAAAK +GEVLAVGNGR +ILENGEVKPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +LIEVPVEYIAGK +IETLFTNDLDHGPYISETLR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +EEIEGSGILSK +DDIIDVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGVVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +AVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGADVR +VDLSTFSDEEVMR +GMPIATPVFDGAK +LGDLPTSGQIR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVQDVLER +VMSTGQTYNADR +DIHGAPVGDTLTLAR +EVIYVDSPSK +LPAVNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINGER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVQDVLER +VMSTGQTYNADR +DIHGAPVGDTLTLAR +EVIYVDSPSK +LPAVNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINGER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVQDVLER +VMSTGQTYNADR +DIHGAPVGDTLTLAR +EVIYVDSPSK +LPAVNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINGER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +INIIDTPGHVDFTIEVER +YLGGEELTEAEIK +HASDDEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDMGIR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDEAPSNVAQAVIEAR +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +INIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDMGIR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDEAPSNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +VAALEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNAEVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +ILELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGTIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +ILELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGTIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +QATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEIR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAQGTDVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLAEQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +QYDINEAIALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNAATGK +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNATTGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMINAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQMGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +INGQVITIK +TLNDAVEVK +HADNTLTFGPR +DGYADGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +QVIGQVAADLR +LIDQATAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDHK +HAVIALTSIYGVGK +AILAAAGIAEDVK +ISELSEGQIDTLR +FVVEGDLR +AIISDVNASDEDR +QTGRPHGFLR +MSLSTEATAK +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVTDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFDK +LENSLGGIK +AVTLYLGAVAATVR +SQDLASQAEESFVEAE +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVTLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAESIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Escherichia coli.parquet b/image_ref/fasta/optimal peptide set/Escherichia coli.parquet new file mode 100644 index 0000000000000000000000000000000000000000..4f6f2d57d343835c012b023b8906931741346268 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Escherichia coli.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Hafnia alvei.fasta b/image_ref/fasta/optimal peptide set/Hafnia alvei.fasta new file mode 100644 index 0000000000000000000000000000000000000000..bdbcb2b7438a871d89610bffa9beb75711c70d15 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Hafnia alvei.fasta @@ -0,0 +1,595 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +TEFDVILK +GATGLGLK +DLVESAPATLK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +SVSDAEATAE +QIEQEQMK +QDVPAFRPGDSLEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVIDSITVK +VAFQAVIK +QNGISYSR +ILADIAVFDK +VAFAALVEK +MYAVFQSGGK +VSEGQTIR +IGVPFVSGGK +AEIVAHGR +MFTIEATAR +AGFYEQVIALMIDGK +LTHVDFVR +MFTIEATAR +EGFYEQVIALMIDGK +LTHVDFVR +FGGEAVLAGSIIVR +DHTLFALADGK +RPVAGNNR +SHAMNATK +FLPNLHSHR +GIETVLAEIR +SHDALTTTTVSVDK +VSGETHLR +HHVTADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLSSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NIEFFEAR +LADVLAAAEAR +INELGAVTLASK +LFGSIGTR +DIADAVTAAGVQVAK +RPFYQVVVTDSR +VGFFNPLAAGQAESLR +VNHWVGLGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIATGDK +AAAQNAFNEMQPIVDR +SNLVAQINAMQ +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YSATITNAAGQIHR +QLAYPINK +NAVTEASPMVK +EDFANETADDADAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +LIAEAMEK +EMLPVLEAVAK +ATLEDLGQAK +DTTIIIDGIGDEAAIQGR +QIEDATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GANEDQNVGIK +QIVINAGEEASVIANNVK +ADMGAAGGMGGMGGMGGMM +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVIAAVEELK +LIAEAMEK +EMLPVLEAVAK +ATLEDLGQAK +DTTIIIDGIGDEAAIQGR +QIEDATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GANEDQNVGIK +QIVINAGEEASVIANNVK +ADMGAAGGMGGMGGMGGMM +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVIAAVEELK +LIAEAMEK +EMLPVLEAVAK +ATLEDLGQAK +DTTIIIDGIGDEAAIQGR +QIEDATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GANEDQNVGIK +QIVINAGEEASVIANNVK +ADMGAAGGMGGMGGMGGMM +MNIRPLHDR +SAGGIVLTGSAAGK +GEIVAVGK +ILENGEVKPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAVVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQHGLEAAFR +SVFPIQSYSGNSELQYVSYR +LGEPVFDVK +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNFTTEQILDLFFDK +LQMELVPER +GETASFDIEADGK +DGITLIEVPVEYIAGK +IETLFTNDLDHGAYISETIR +LSALVEIYR +MMRPGEPPTR +EAAENLFENLFFSEDR +YDLSAVGR +EEIEGSGILSK +DDIIEVMR +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGVIQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +LDESGIVYIGAEVK +GGDILVGK +GETQLTPEEK +VPNSVSGTVIDVQVFTR +ALEIEEMQLK +DLTEELQILEAGLFAR +IHDVLVSGGVEAEK +WLELGLADEAK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGDNTR +QTVDLNTFTDDEVMR +GLPIATPVFDGAK +ELLTLGGIPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +NIVDGDHR +MEPGMPESFNVLLK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQHGLEAAFR +SVFPIQSYSGNSELQYVSYR +LGEPVFDVK +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNFTTEQILDLFFDK +LQMELVPER +GETASFDIEADGK +DGITLIEVPVEYIAGK +IETLFTNDLDHGAYISETIR +LSALVEIYR +MMRPGEPPTR +EAAENLFENLFFSEDR +YDLSAVGR +EEIEGSGILSK +DDIIEVMR +GEVDDIDHLGNR +SVGEMAENQFR 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+LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGANLLQLLEGR +VVNIASYQVSPNDVVSVR +AALELAEQR +EKPTWLEVDAAK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMMNVALNSGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLASMK +SPEMVAAK +FGSELLAK +FVNILMVDGK +STAEAIVYTALETLAQR +NELEAFEVALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +VAVTMPSSK +VAIANVLK +EEGFIEDFK +IEGDTKPVLELVLK +AVVESIQR +VMAGLGIAVISTSK +MAETQYYGTGR +VFIKPGSGK +SLEQYFGR +QPLELVDMVEK +FDLYITVK +GGGTSGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Hafnia alvei.parquet b/image_ref/fasta/optimal peptide set/Hafnia alvei.parquet new file mode 100644 index 0000000000000000000000000000000000000000..0f125f0fef500c8b064a5b8c00ba28273ee4325c Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Hafnia alvei.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Klebsiella aerogenes.fasta b/image_ref/fasta/optimal peptide set/Klebsiella aerogenes.fasta new file mode 100644 index 0000000000000000000000000000000000000000..0c5a8e664965665c8d7104f1a8b8378cc33347be --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Klebsiella aerogenes.fasta @@ -0,0 +1,601 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +LAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVEGGVIK +AEVVAHGR +MFTINAEVR +AEFYGEVLTLVVDGK +LTHIDFVR +MFTINAEVR +AEFYGEVLTLVVDGK +LTHIDFVR +FGGEAVLAGSIIVR +DHTLFALTDGK +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAANAR +AEAINALGTVTIASK +LFGSIGTR +DIADAVSAAGVAVAK +TTGEHEVDFQVHSEVFAK +LVVNVVAE +RPFYQVVVTDSR 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+VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPNNVAQAVIEAR +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDEEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDMGIR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DGGFQAFADK +VLDAAVAGK +ISDVEVLK +IGENINIR +IAILEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNAEK +MYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AMITAEVR +LSDLAHVEGDVVDLNTLK +AANIIGIQIEFAK +VILSGEVTRPVTVR +AAIEAAGGK +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AMITAEVR +LSDLVHVEGDVVDLNTLK +AANIIGIQIEFAK +VILSGEVTRPVTVR +AAIEAAGGK +GLAQGTDVSFGTFGLK +VFPDKPITEKPLEVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +EAFGLAAAK +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGPNAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNLAIFNAATGK +SVEELNAELLNLLR +MQAASGQLQQTHLLK +VVNPELHK +GKPFAPLVEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVSPWGLQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +VNGQVITIK +TLNDAVEVK +HADNALTFGPR +DGYVDGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +GDVVNLALGFSHPVEHK +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HTVIALTAIFGIGK +ISELSEEQIDSLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGFLR +MSLSVEAK +AQIVSEFGR +MSLSVEAK +AQIVSEFGR +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +GEILGGMAAVEQPEPAAQPK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVK +ANDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNTGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVR +AYGSTNPINVVR +ATIDGLENMK +SPDMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +TELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELTDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDIKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Klebsiella aerogenes.parquet b/image_ref/fasta/optimal peptide set/Klebsiella aerogenes.parquet new file mode 100644 index 0000000000000000000000000000000000000000..846538bef8481ab50d926b098ffbf6ae6902bdc4 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Klebsiella aerogenes.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Klebsiella michiganensis.fasta b/image_ref/fasta/optimal peptide set/Klebsiella michiganensis.fasta new file mode 100644 index 0000000000000000000000000000000000000000..870326c6aff68e760039bba396a7564c35e583e7 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Klebsiella michiganensis.fasta @@ -0,0 +1,462 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSISVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +LAFTALVEK +MYAVFQSGGK +VSEGQTIR +IGVPFVEGGVIK +AEVVAHGR +MFTINAEVR +LSHIDFVR +MFTINAEVR +LTHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +FSVPGTSK +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LAEVLGAANAR +AEAINALGTVTIASK +LFGSIGTR +DIADAVTAAGVAVAK +TTGEHEVDFQVHSEVFAK +LVVNVVAE +RPFYQVVVTDSR +VGFFNPIASATEEGTR +IAHWVGLGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTGAITAAEGTIHR +QLAYPINK +HAVTEASPMVK +EDFANETADDSEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANNVK +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANNVK +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANNVK +MSIRPLHDR +SAGGIVLTGSAAAK +GEIIAVGK +ILENGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SYSGNSELQYVSYR +LGEPVFDVK +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +EDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTIIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFGR +IYAVLVSGGIEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFTDEEVMR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMAAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVPDVLER +VMSTGQVYNADR +DILGAPVGDTLTLAR +EVIYVDSPSK +LPPLNNIQELR +GYASLDYNFK +FQASNMVR +VDVLINGER +VDALALITHNDNAPYR +QQFDIAIQAAIGNHIIAR +QVGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFAALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTILNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +ASYSMEFLK +YDDAPNNVAQAVIEAR +MPRPIPLER +NIGISAHIDAGK +ILFYTGMSHK +LGEVHDGAATTDWMAQEQER +INIIDTPGHVDFTIEVER +MDRPGADFFR +VVQMMIDR +MVSAAAEASDELMDK +YLETGELDEAEIVAGLR +HPGDDEPFSALAFK +LMTDPYVGQLTFIR +GDAVWNPVK +IVLMQANDR +MEFPEPVISLAIEPK +LAAEDPSFR +EFGVEANIGRPQVTYR +EYIPSVEK +EAMGTGVLAGYPVVDIK +ATLTFGSYHDVDSSEMAFR +MAAIFGFK +GMVQGMEER +ADVPLAEMFGYSTTLR +ATYSMEFHHYAEAPR +NVAEAIIASR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIITK +DGGFQAFANK +VLDAAVAGK +ITDVEVLK +IGENINIR +VSSLEGEVLGSYQHGAR +IGVLVAAK +GASEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMDPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDADWEAK +IIELAGYLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGSDIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +LASELALR +AEYTPHVDTGDYIIVLNAEK +MYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AMITAEVR +LSDLAHVEGDVIDLNTLK +AANIIGIQIEFAK +VILSGEVSRPVTVR +AAIEAAGGK +GLAQGTDVSFGTFGLK +VFPDKPITEKPLEVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +EAFGLAAAK +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGPNAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +LIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNAATGK +SVEELNAELLNLLR +MQAASGQLQQTHLLK +VVNPELHK +GKPFAPLVEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +LIVVESFSVEAPK +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +INGQVITIK +TLNNAVEVK +HAENALTFGPR +DGFVDGWAQAGTAR +ALLNSMVVGVTEGFTK +LQLVGVGYR +GDVVNLALGFSHPVEHK +QVIGQVAADLR +APVVVPAGVDVK +INGQVITIK +TLNNAVEVK +HADNALTFGPR +DGFVDGWAQAGTAR +ALLNSMVVGVTEGFTK +LQLVGVGYR +GDVVNLALGFSHPVEHK +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATINQLVR +IAGINIPDHK +HTVIALTAIFGIGK +ISELSEEQIESLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGFLR +MSLSVEAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFDK +LENSLGGIK +AVSLYLSAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADLAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +GEILGGMAAVEQPEPAAQPK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLTLLEGR +VVNIASYQVK +ANDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNHGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAEAIVYSALETLAQR +NELEAFEVALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDIKPELELTLK +AVVESIQR +VMAGLGIAVISTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Klebsiella oxytoca.fasta b/image_ref/fasta/optimal peptide set/Klebsiella oxytoca.fasta new file mode 100644 index 0000000000000000000000000000000000000000..e1b87cbbcef6e1210a1878683c9ae4b42f2a66a3 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Klebsiella oxytoca.fasta @@ -0,0 +1,554 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSISVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +LAFTALVEK +MYAVFQSGGK +VSEGQTIR +IGVPFVEGGVIK +AEVVAHGR +MFTINAEVR +LTHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +FSVPGTSK +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LAEVLSAANAR +AEAINALGTVTIASK +LFGSIGTR +DIADAVTAAGVAVAK +TTGEHEVDFQVHSEVFAK +LVVNVVAE +RPFYQVVVTDSR +VGFFNPIASATEEGTR +IAHWVGQGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTGAITAAEGTIHR +QLAYPINK +HAVTEASPMVK +EDFANETADDSEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANTVK +MSIRPLHDR +SAGGIVLTGSAAAK +GEIIAVGK +ILENGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SYSGNSELQYVSYR +LGEPVFDVK +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +EDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGLVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTIIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFGR +IYAVLVSGGIEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFTDEEVMR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMAAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVPDVLER +VMSTGQVYNADR +DILGAPVGDTLTLSR +EVIYVDSPSK +LPPLNNIQELR +GYASLDYNFK +FQASNMVR +VDVLINGER +VDALALITHNDNAPYR +QQFDIAIQAAIGNHIIAR +QVGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFAALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTILNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +ASYSMEFLK +YDDAPNNVAQAVIEAR 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0000000000000000000000000000000000000000..5f5bee7866332fb6d8bc79a977a1b8a057d1afc7 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Klebsiella pneumoniae.fasta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+MVSAAAEASDELMDK +YLETGELDEAEIVAGLR +HPSDDEPLSALAFK +LMTDPYVGQLTFIR +GDAVWNPVK +IVLMQANDR +MEFPEPVISLAIEPK +LAAEDPSFR +EFGVEANIGRPQVTYR +EYIPSVEK +EAMGTGVLAGYPVVDVK +ATLTFGSYHDVDSSEMAFR +MAAIFGFR +GMVQGMEER +ADVPLAEMFGYSTTLR +ATYSMEFHHYAEAPR +NVADEIIASR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DGGFQAFADK +VLDAAVAGK +ISDVEVLK +IGENINIR +IAVLEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGHLDTYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGTINPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNAEK +MYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL 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+ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +INGQVITIK +TLNDAVEVK +HADNALTFGPR +DGYADGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATINQLVR +IAGINIPDHK +HTVIALTAIFGIGK +ISELSEEQIDILR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGFLR +MSLSVEAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFDK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +GEILGGMAAVEQPEPAAQPK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVK +ANDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNHGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVR +AYGSTNPINVVR +ATIDGLENMK +SPDMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAETIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELTDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Klebsiella pneumoniae.parquet b/image_ref/fasta/optimal peptide set/Klebsiella pneumoniae.parquet new file mode 100644 index 0000000000000000000000000000000000000000..82959a5d73080cddde114046927a58fabe640292 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Klebsiella pneumoniae.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Klebsiella variicola.fasta b/image_ref/fasta/optimal peptide set/Klebsiella variicola.fasta new file mode 100644 index 0000000000000000000000000000000000000000..3ab0ebca8fa9ca7cf641b5bea81da3581fef6f38 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Klebsiella variicola.fasta @@ -0,0 +1,460 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVEGGVIK +AEVVAHGR +MFTINAEVR +AEFYGEVVTLVIDGK +LTHIDFVR +FGGEAVLAGSIIVR +DHTLFALTDGK +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVVNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLSAAEAR +AAQINALESVTIASK +LFGSIGTR +DIADAVTAAGVK +NVGEHEVDFQVHSEVFAK +VIINVVAE +RPFYQVVVTDSR +VGFFNPIASGAEEETR +IAHWVGLGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTGAITAAAGTIHR +QLAYPINK +HAVTEASPMVK +EDFANETADDSEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVIAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEESAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTGQNEDQNVGIK +QIVSNAGEEPSVVANNVK +MSIRPLHDR +SAGGIVLTGSAAAK +GEIIAVGK +ILENGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +LGEPVFDVK +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +IYAVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGADVR +VDLNTFSDEEVLR +GMPIATPVFDGAK +ELLQLGDLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMAAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VADEIEDIVGIDAHDAVR +TGVGVPDVLER +VMSTGQVYNADR +DILGAPVGDTLTAAR +EVIYVDSPSK +LPPLNNIQELR +GVQTNMVYHGK +QVALTYEIPMAEVVLDFFDR +GYASLDYNFK +FQASNMVR +VDVLINGER +VDALALITHNDNAPYR +QQFDIAIQAAIGNHIIAR +QVGNVELPQEAFLAILHVGK +MPRPIPLER +NIGISAHIDAGK +ILFYTGMSHK +LGEVHDGAATTDWMAQEQER +INIIDTPGHVDFTIEVER +MDRPGADFFR +VVQMMIDR +MVSAAAEASDALMDK +YLETGELDEAEIVAGLR +HPSDDEPLSALAFK +LMTDPYVGQLTFIR +GDAVWNPVK +IVLMQANDR +MEFPEPVISLAIEPK +LAAEDPSFR +EFGVEANIGRPQVTYR +EYIPSVEK +EAMGTGVLAGYPVVDVK +ATLTFGSYHDVDSSEMAFR +MAAIFGFR +GMVQGMEER +ADVPLAEMFGYSTTLR +ATYSMEFHHYAEAPR +NVADEIIASR +MPRPIPLER +NIGISAHIDAGK +ILFYTGMSHK +LGEVHDGAATTDWMAQEQER +INIIDTPGHVDFTIEVER +MDRPGADFFR +VVQMMIDR +MVSAAAEASDELMDK +YLETGELDEAEIVAGLR +HPSDDEPLSALAFK +LMTDPYVGQLTFIR +GDAVWNPVK +IVLMQANDR +MEFPEPVISLAIEPK +LAAEDPSFR +EFGVEANIGRPQVTYR +EYIPSVEK +EAMGTGVLAGYPVVDVK +ATLTFGSYHDVDSSEMAFR +MAAIFGFR +GMVQGMEER +ADVPLAEMFGYSTTLR +ATYSMEFHHYAEAPR +NVADEIIASR +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDEEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDMGIR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DGGFQAFADK +VLDAAVAGK +ISDVEVLK +IGENINIR +IAVLEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGHLDTYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGHLDTYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNAEK +MYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AMITAEIR +LSDLAHVEGDVVDLNALK +AANIIGVQIEFAK +VILSGEVTRPVTVR +AAIEAAGGK +GLAQGTDVSFGTFGLK +VFPDKPITEKPLEVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +EAFGLAAAK +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGANAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQISNLAIFNAATGK +SVEELNAELLNLLR +MQAASGQLQQTHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVSPWGLQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEITGSGK +SGGVTFAARPQDHSQK +SILSELVR +DANGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +VNGQVITIK +TLNDAVEVK +HADNALTFGPR +DGYVDGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +GDVVNLALGFSHPVEHK +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATINQLVR +IAGINIPDHK +HTVIALTAIFGIGK +ISELSEEQIDILR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGFLR +MSLSVEAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFDK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +GEILGGMAAVEQPEPAAQPK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVK +ANDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAEAIVYSALETLAQR +NELEAFEVALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELTDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDIKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Klebsiella variicola.parquet b/image_ref/fasta/optimal peptide set/Klebsiella variicola.parquet new file mode 100644 index 0000000000000000000000000000000000000000..af5bee95f83685fefd01d9a8c00ade5ec9772974 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Klebsiella variicola.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Morganella morganii.fasta b/image_ref/fasta/optimal peptide set/Morganella morganii.fasta new file mode 100644 index 0000000000000000000000000000000000000000..6b79edd0f05b1076f905271b45a3ea2fc57dc5f0 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Morganella morganii.fasta @@ -0,0 +1,820 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +AESQTEAAAE +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSISVK +QLEQEQMK +QDVPSFRPGDSVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSISVK +VAFQAVIK +QNGLSYSR +ILADIAVFDK +AAFTALVEK +MYAVFQSGGK +VSEGQIVR +IGAPVVEGVK +AEVVTHGR +MLTINAELR +AEFYEVLNLVIDGK +LTHIDFLR +MLTINAELR +LTHIDFLR +MLTINAELR +LTHIDFLR +FGGEAVLAGSIIVR +DHTLFALADGK +FGGEAVLAGSIIVR +DHTLFALADGK +RPMSGNNR +SHALNATK +FLPNLHSHR +GIEAVLADLR +MAVQQNKPTR +SHDALSATLVSVDK +TSGETHLR +HHVTADGYYR +LVSSEGTGHFYTTTK +TFQPSVLK +MQVLSSLK +MQVILLDK +VANLGSLGDQVNVK +NYLVPQGK +NIEFFEAR +LADVLAAAHAR +INALGVVTLSSK +LFGSVGTR +DIADAVTAAGVEVAK +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NIEFFEAR +LADVLAAAHAR +INALGVVTLSSK +LFGSVGTR +DIADAVTAAGVEVAK +RPFYQIVVTDSR +IGFFNPIAAGK +VEHWVGLGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIAAGDK +EAAQNAFNDMQPLVDR +ANLAAQIK +ENEPFDVALR +AGVLAEVR +EFYEKPTTVR +TAITNAEGQIHR +QLAYPINK +HAVTEPSPMVK +DMSDDIEENDEAEETEE +TAITNAEGQIHR +QLAYPINK +HAVTEPSPMVK +DMSDDVEENDEAEETEE +GVNVLADAVK +SFGAPVITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +LIAEAMDK +ELLPVLEGVAK +ATLEDLGQAK +DTTTIIDGVGDEETIAAR +QQIEDSTSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGTALVR +VAAALTALTGDNEDQNVGIR +QIVENAGEEPSVVVNTVK +MDLGAAGGMGGMGGMGGMM +GVNVLADAVK +SFGAPVITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +LIAEAMDK +ELLPVLEGVAK +ATLEDLGQAK +DTTTIIDGVGDEETIAAR +QQIEDSTSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGTALVR +VAAALTALTGDNEDQNVGIR +QIVENAGEEPSVVVNNVK +MDLGAAGGMGGMGGMGGMM +SAGGIVLTGTAAGK +GEVLAVGNGR +ILENGEMKPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +SAGGIVLTGTAAGK +GEVLATGNGR +ILENGEMKPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIELDPDGQNGLEAAFR +SVFPIQSYSGNAELQYVSFR +LGEPVFDVK +GVTFSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPASIILR +AMNFSTEDILNLFFEK +LTMTLIPER +GETASFDIEANGK +DEVSQIEVPVEYIAGK +LSALVEIYR +MMRPGEPPTR +EAAENLFENLFFSEDR +YDLSAVGR +DDSDGTGILSQQDITDVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGMVQYVDASR +VNEDEMYAGEAGIDIYSLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +LDESGIVYIGAEVK +GGDILVGK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLR +DLTEELQILEAGLFSR +SVLINGGMEADK +WLELALTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +INPIEDMPYDEK +GNPVDIVLNPLGVPSR +MNIGQILETHLGMAAK +AYDLGNDPR +VDLNTFSDEEVLR +GMPTATPVFDGAK +ALLTLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIELDPDGQNGLEAAFR +SVFPIQSYSGNAELQYVSFR +LGEPVFDVK +GVTFSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPASIILR +AMNFSTEDILNLFFEK +LTMTLIPER +GETASFDIEANGK +DEVSQIEVPVEYIAGK +LSALVEIYR +MMRPGEPPTR +EAAENLFENLFFSEDR +YDLSAVGR +DDSDGTGILSQQDITDVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGMVQYVDASR +VNEDEMYAGEAGIDIYSLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +LDESGIVYIGAEVK +GGDILVGK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLR +DLTEELQILEAGLFSR +SVLINGGMEADK +WLELALTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +INPIEDMPYDEK +GNPVDIVLNPLGVPSR +MNIGQILETHLGMAAK +AYDLGNDPR +VDLNTFSDEEVLR +GMPTATPVFDGAK +ALLTLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIELDPDGQNGLEAAFR +SVFPIQSYSGNAELQYVSFR +LGEPVFDVK +GVTFSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPASIILR +AMNFSTEDILNLFFEK +LTMTLIPER +GETASFDIEANGK +DEVSQIEVPVEYIAGK +LSALVEIYR +MMRPGEPPTR +EAAENLFENLFFSEDR +YDLSAVGR +DDSDGTGILSQQDITDVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR 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+IEGDIKPELELTLK +AVVESIQR +DELPQVMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGSGNIVINQR +SLENYFGR +QPLELVEMLEK +LDLYITVK +GGGISGQAGAIR +ALMAYDESLR diff --git a/image_ref/fasta/optimal peptide set/Morganella morganii.parquet b/image_ref/fasta/optimal peptide set/Morganella morganii.parquet new file mode 100644 index 0000000000000000000000000000000000000000..023ca9444f57f02f12bcd82697aa4af7aad2aab9 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Morganella morganii.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Proteus mirabilis.fasta b/image_ref/fasta/optimal peptide set/Proteus mirabilis.fasta new file mode 100644 index 0000000000000000000000000000000000000000..8fea28c520c404ded95786265c9b2a29e048cf1c --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Proteus mirabilis.fasta @@ -0,0 +1,521 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +ALEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFTVLGPR +AGDNAPMAYIELVDR +ADSETEAAAE +QIEQEQMK +QDVPSFRPGDNVEVK +VWVVEGSK +LQAFEGVVIAIR 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+IQELGATR +DAAAVVGK +GITVVAFDR +SGFQYHGR +VQALADAAR +QYDINEAVALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMDDLADK +AGEMDFDVVIASPDAMR +VVGQLGQILGPR +VGTVTPNVAEAVQNAK +NGIIHTTIGK +ENLEALLIALK +QYDINEAVALLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGANAEAAK +AAGAELVGMDDLADK +AGEMDFDVVIASPDAMR +VVGQLGQILGPR +VGTVTPNVAEAVQNAK +NGIIHTTIGK +ENLEALLIALK +METLAMHR +VSQALEILTYTNK +IFVDEGPTMK +TSHITVVVSDR +LFEVEVEGVNTLLVK +EGQNLDFIGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIHVSNVAIFNAATGK +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNK +SVEELNSELLNLLR +MQAASGQLQQSHLLK +SVEELNAELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPYAPLLEK +DGVPAVVER +SANIALVLYK +AGDQIQSGVDSAIK +TGNALPMR +NIPVGSTVHNIELKPGK +SAGTYAQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +VVNPELHK +GKPYAPLLEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDSAIK +AGNALPMR +NIPVGSTVHNIELKPGK +SAGTYAQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLIGLGLR +GMVNLVSYMVK +ATLVGLGLR +GMVNLVSYMVK +IFTEDGVSIPVTVIEIENNR +TAETDGYNAIQVTTGSK +VSKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSNLIVKPAVK +IFTEDGVSIPVTVIEIENNR +TAETDGYNAIQVTTGSK +VSKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVSGSGK +SGGVSFAAKPQDHSQK +SILSELVR +DAAGIDPVSLIAFDK +VVMTADAVK +QLMTQFGYNSVMQVPR +ITLNMGVGEAIADK +LISIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFNFPFR +LMAQFGYNSVMQVPR +ITLNMGVGEAIADK +LISIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFNFPFR +APVVIPAGVEVK +LNGQVISIK +TIHNAVEVK +EGFADAWAQAGTSR +SLLNSMVVGVTEGFTK +LQLVGVGYR +QVIGQVAAELR +APVVIPAGVEVK +LNGQVISIK +TIHNAVEVK +EGFADAWAQAGTSR +SLLNSMVVGVTEGFTK +LQLVGVGYR +QVIGQVAAELR +APVVIPAGVEVK +LNGQVISIK +TIHNAVEVK +EGFADAWAQAGTSR +SLLNSMVIGVTEGFTK +LQLVGVGYR +QVIGQVAAELR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHLNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATINQLVR +MATINQLVR +IAGINIPDHK +HTVIALTSIFGIGK +ISELSEEQIDK +YVVEGDLR +QTGRPHGFLR +AIISDVNASDEDR +QTGRPHGFLR +MSLSTEAK +MSLSTEAK +SIVVAIER +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVTDEMVGHK +LGEFAPTR +DMLQAGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLEVQSQDGTFDK +LENSLGGIK +LYLSAVATAVR +SQDLAVQAEEGLVEAE +DMLQAGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELTK +WLGGMLTNWK +DLEVQSQDGTFDK +LENSLGGIK +LYLSAVATSVR +SQDLAVQAEEGLVEAE +IVIERPAK +VTIHTARPGIVIGK +TVADIAGVPAQINIAEVR +LVADSIASQLER +LGGAEIAR +ADIDYNTSEAHTTYGVLGVK +EGTDLFLK +LEQAPGQHGAR +LSDYGVQLR +GNTGENLLTLLEGR +VVNIASYQVSPNDVISVR +AALELAEQR +EKPTWLEVDAAK +TDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +TVALNNGTLFHPVK +VFMQPAHEGTGIIAGGAMR +AVLEVAGVR +TYGSTNPINVVR +ATLDALDSMK +SPEMVAAK +FGSELLAK +FVNILMVDGK +STAEAIVYNALETLAQR +TELDAFELALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +FGSELLAK +FVNILMVDGK +STAEAIVYNALETLAQR +SELDAFELALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +MSMQDPIADMLTR +VAVTMPSSK +EEGYIEDFK +IEGDIKPELELTLR +AVVESIQR +DELPQVMAGLGIAVVSTSK +MSMQDPIADMLTR +VAVTMPSSK +EEGYIEDFK +IEGDTKPELELTLR +AVVESIQR +DELPQVMAGLGIAVISTSK +MAENQYYGTGR +VFIKPGSGNITINQR +TLEQYFGR +QPLELVEMLEK +LDLYITVK +GGGISGQAGAIR +ALMAYDETLR diff --git a/image_ref/fasta/optimal peptide set/Providencia stuartii.parquet b/image_ref/fasta/optimal peptide set/Providencia stuartii.parquet new file mode 100644 index 0000000000000000000000000000000000000000..a13e998e1ee6d72f04715120521a6482eb033497 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Providencia stuartii.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Raoultella ornithinolytica.fasta b/image_ref/fasta/optimal peptide set/Raoultella ornithinolytica.fasta new file mode 100644 index 0000000000000000000000000000000000000000..248d7a4a03bfd0753976d18975aa841b6d9d0cb2 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Raoultella ornithinolytica.fasta @@ -0,0 +1,475 @@ +TEFDVILK +SATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QDVPSFRPGDTVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +LAFTALVEK +MYAVFQSGGK +VSEGQTIR +IGVPFVEGGVIK +AEVVAHGR +MFTINAEVR +AEFYGEVLTIVIDGK +LTHIDFVR +FGGESVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIDTVLSELR +FSVPGTSK +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAANAR +AEAINALGTVTIASK +LFGSIGTR +DIADAVTAAGVAVAK +TTGEHEVDFQVHSEVFAK +LVVNVVAE +RPFYQVVVTDSR +VGFFNPIASANEEETR +IAHWVGQGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YTGAITAAEGTIHR +QLAYPINK +HAVTEASPMVK +EDFANETADDSEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEGAIQGR +QIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VDDALHATR +AAVEEGVVAGGGVALVR +LAGLTAQNEDQNVGIK +QIVSNAGEEPSVVANNVK +MSNIKPLHDR +LSAGGIVIPDSATEKPIK +GEVVAVGTGK +VLDNGQVR +LDGVELLVVK +EDDLFAILG +MSIRPLHDR +SAGGIVLTGSAAAK +GEIIAVGK +ILENGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SYSGNSELQYVSYR +LGEPVFDVK +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFNR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFGR +IYAVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFTDDEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SYSGNSELQYVSYR +LGEPVFDVK +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELVPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFGR +IYAVLVAGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGTDVR +VDLNTFTDDEVLR +GMPIATPVFDGAK +ELLQLGGLPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDYK +IDLPAADPER +VADEIEDIVGIDAADAVR +TGVGVPDVLER +VMSTGQVYNADR +DILGAPVGDTLTTSR +EVIYVDSPSK +LPPLNNIQELR +GVQTNMVYHGK +QVALTYEIPMAEVVLDFFDR +GYASLDYNFK +FQASNMVR +VDVLINGER +VDALALITHNDNAPYR +QQFDIAIQAAIGNHIIAR +QVGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +VNIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDEEPFAALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTILNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +AGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +ASYSMEFLK +YDDAPNNVAQAVIEAR +MPRPIPLER +NIGISAHIDAGK +ILFYTGMSHK +LGEVHDGAATTDWMAQEQER +INIIDTPGHVDFTIEVER +MDRPGADFFR +VVQMMIDR +MVSAAAEANDELMDK +YLESGELSEADIVAGLR +HPGDDEPFSALAFK +LMTDPYVGQLTFIR +GDAVYNPVK +IVLMHANDR +MEFPEPVISLAIEPK +LASEDPSFR +EFGVEANIGRPQVTYR +EYIPSVEK +EAMGTGVLAGYPVVDVK +ATLTFGSYHDVDSSEMAFR +MAAIFGFK +GMVQGMEER +ADVPLAEMFGYSTTLR +ATYSMEFHHYAEAPR +NVADAIIASR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIITK +DGGFQAFANK +VLDAAVAGK +ITDVEVLK +IGENINIR +VASLEGDVLGSYQHGAR +IGVLVAAK +GADQELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMDPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGEADWEAK +IIELAGYLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGSIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGSDIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNAEK +MYYHHTGHIGGIK +EATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AMITAEVR +LSDLAHVEGDVVDLNTLK +AANIIGIQIEFAK +VILSGEVARPVTVR +AAIEAAGGK +GLAQGTDVSFGTFGLK +VFPDKPITEKPLEVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +EAFGLAAAK +LQELGATR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAISLLK +FVESVDVAVNLGIDAR +GATVLPHGTGR +VAVFAQGPNAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +METLAQHR +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +LIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNAATGK +SVEELNAELLNLLR +MQAASGQLQQTHLLK +VVNPELHK +GKPFAPLLEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVSPWGLQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AIQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQLGNER +VTVQSLDVVR +GAVPGATGSDLIVKPAVK +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVIPAGVDVK +INGQVITIK +TLNDAVEVK +HADNALTFGPR +DGFADGWAQAGTAR +ALLNSVVIGVTEGFTK +LQLVGVGYR +GDVVNLALGFSHPVEHK +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATINQLVR +IAGINIPDQK +HTVIALTAIFGIGK +ISELSEEQIESLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHGFLR +MSLSVEAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +GEILGGMAAVEQPEPAAQPK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVK +ANDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNHGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAEAIVYSALETLAQR +NELEAFEVALDNVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDIKPELELTLK +AVVESIQR +VMAGLGIAVISTSK +MAENQYYGTGR +VFIKPGSGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Raoultella ornithinolytica.parquet b/image_ref/fasta/optimal peptide set/Raoultella ornithinolytica.parquet new file mode 100644 index 0000000000000000000000000000000000000000..2bcab8f9cedd55542aab27d599fdf3ad39ef7132 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Raoultella ornithinolytica.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Salmonella enterica.fasta b/image_ref/fasta/optimal peptide set/Salmonella enterica.fasta new file mode 100644 index 0000000000000000000000000000000000000000..3aa4c0e3a8ea33738ee7ea298097ec728b1e3330 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Salmonella enterica.fasta @@ -0,0 +1,474 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +QLEQEQMK +QNVPSFRPGDTVEVK +VWVVEGTK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVVDSIAVK +VAFQAVIK +QNGISYSK +ILADIAVFDK +VAFTALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGVIK +AEVVAHGR +MFTINAEVR +AEFYSEVLTLVVDGK +LTHIDFVR +FGGEAVLAGSIIVR +RPVTGNNR +SHALNATK +FLPNLHSHR +GIETVLSELR +MAVQQNKPTR +SHDALTAVTSLSVDK +HHITADGYYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLNSLR +MQVILLDK +VANLGSLGDQVNVK +NVEYFEAR +LADVLAAANAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVDVAK +TTGEHEVNFQVHSEVFAK +VIINVVAE +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEYFEAR +LADVLAAANAR +INALETVTIASK +LFGSIGTR +DIADAVTAAGVDVAK +TTGEHEVNFQVHSEVFAK +VIINVVAE +RPFYQVVVTDSR +VGFFNPIASEK +IAHWVGQGATISDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VYAAIEAGDK +AFNEMQPIVDR +ANLTAQINK +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YSAAITGAEGK +QLAYPINK +HAVTEASPMVK +DDFANETADDAEAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVAAAVEELK +AIAQVGTISANSDETVGK +LIAEAMDK +EMLPVLEAVAK +ATLEDLGQAK +DTTTIIDGVGEEAAIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GQNEDQNVGIK +MSIRPLHDR +SAGGIVLTGSAAGK +GEIIAVGK +ILDNGTVQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELIPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIDVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +AVLVSGGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGADVR +VDLSTFSDDEVLR +GMPIATPVFDGAK +LGDLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +MVYSYTEK +RPQVLDVPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +GVTYSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFEK +LQMELIPER +GETASFDIEANGK +HIEVPVEYIAGK +IETLFTNDLDHGPYISETVR +LSALVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIDVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGTVQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLSEELQILEAGLFSR +AVLVSSGVEAEK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +AYDLGADVR +VDLSTFSDDEVLR +GMPIATPVFDGAK +LGDLPTSGQITLFDGR +TGEQFERPVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +SLGINIELEDE +NFSIIAHIDHGK +EMEAQVLDSMDLER +AQSVTLDFK +IDLPAADPER +VAEEIEDIVGIDATDAVR +TGVGVTDVLER +VMSTGQTYNADR +DILGAPVGDTLTSAR +ETIYVDSPSK +LPPLNNIYELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QIGNVELPQEAFLAILHVGK +NIGISAHIDAGK +ILFYTGVNHK +IGEVHDGAATMDWMEQEQER +GITITSAATTAFWSGMAK +INIIDTPGHVDFTIEVER +YLGGEELTEEEIK +HASDDEPFSALAFK +IATDPFVGNLTFFR +VYSGVVNSGDTVLNSVK +IVQMHANK +AGDIAAAIGLK +MEFPEPVISIAVEPK +EFNVEANVGKPQVAYR +GQYGHVVIDMYPLEPGSNPK +GYEFINDIK +GGVIPGEYIPAVDK +SGPLAGYPVVDLGVR +LHFGSYHDVDSSELAFK +LAASIAFK +AKPVLLEPIMK +VEVETPEENTGDVIGDLSR +GQESEVTGVK +IHAEVPLSEMFGYATQLR +ASYTMEFLK +YDDAPNNVAQAVIEAR +MAEITASLVK +ALTEANGDIELAIENMR +AGNVAADGVIK +DAGFQAFADK +VLDAAVAGK +ITDVEVLK +IGENINIR +VASLEGDVLGSYQHGAR +IGVLVAAK +GADEELVK +EYQVQLDIAMQSGKPK +FTGEVSLTGQPFVMEPSK +EHNADVTGFIR +FEVGEGIEK +VETDFAAEVAAMSK +TKPHVNVGTIGHVDHGK +TTLTAAITTVLAK +AFDQIDNAPEEK +GITINTSHVEYDTPTR +QVGVPYIIVFLNK +ELLSQYDFPGDDTPIVR +ALEGDAEWEAK +IIELAGFLDSYIPEPER +AIDKPFLLPIEDVFSISGR +VGEEVEIVGIK +AGENVGVLLR +GQVLAKPGTIKPHTK +FESEVYILSK +GYRPQFYFR +MVVTLIHPIAMDDGLR +TVGAGVVAK +MALNLQDK +QAIVAEVSEVAK +GALSAVVADSR +AAAFEGELIPASQIDR +LATLPTYEEAIAR +GLPIPVVITVYADR +TPPAAVLLK +SGSGKPNK +AQLQEIAQTK +AADMTGADIEAMTR +SMGLVVED +TFTAKPETVK +DWYVVDATGK +AEYTPHVDTGDYIIVLNADK +VYYHHTGHIGGIK +QATFEEMIAR +VYAGNEHNHAAQQPQVLDI +MIQEQTMLNVADNSGAR +YAGVGDIIK +RPDGSVIR +IISLAPEVL +LNTLSPAEGSK +GIGSGLGK +GFEGGQMPLYR +AAITAEVR +VEGGVVDLNTLK +AANIIGIQIEFAK +VILAGEVTTPVTVR +AAIEAAGGK +GLAAGADVSFGSFGLK +VFPDKPITEKPLAVR +GNVEYWVALIQPGK +VLYEMDGVPEELAR +DAAAAVGK +SGFQYHGR +VQALADAAR +QYDINEAIALLK +FNESVDVAVNLGIDAR +GATVLPHGTGR +VAVFTQGPNAEAAK +AAGAELVGMEDLADQIK +GEMNFDVVIASPDAMR +VVGQLGQVLGPR +VGTVTPNVAEAVK +NGIIHTTIGK +ENLEALLVALK +VSQALDILTYTNK +IFVDEGPSMK +TSHITVVVSDR +LFEVEVEVVNTLVVK +EGQNLDFVGGAE +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNTATGK +DDEVIVLTGK +VIVEGINLVK +HQKPVPALNQPGGIVEK +EAAIQVSNVAIFNAATGK +SVEELNTELLNLLR +MQAASGQLQQSHLLK +VVNPELHK +GKPFAPLVEK +DGIPAVVER +SANIALVLYK +AGDQIQSGVDAAIK +AGNTLPMR +NIPVGSTVHNVEMKPGK +SAGTYVQIVAR +DGAYVTLR +ATLGEVGNAEHMLR +GTAMNPVDHPHGGGEGR +HPVTPWGVQTK +ATLLGLGLR +GMVNAVSFMVK +IFTEDGVSIPVTVIEVEANR +DLANDGYR +AVQVTTGAK +VTKPEAGHFAK +VDVTGTSK +TQDATHGNSLSHR +VPGSIGQNQTPGK +MAGQMGNER +VTVQSLDVVR +DAQSALTVSETTFGR +DFNEALVHQVVVAYAAGAR +AEVTGSGK +SGGVTFAARPQDHSQK +SILSELVR +DATGIDPVSLIAFDK +VVMTADAVK +LMTEFNYNSVMQVPR +ITLNMGVGEAIADK +LITIAVPR +GNYSMGVR +EQIIFPEIDYDK +GLDITITTTAK +ALLAAFDFPFR +APVVVPAGVDVK +INGQVITIK +TLNDAVEVK +HADNALTFGPR +DGYADGWAQAGTAR +ALLNSMVIGVTEGFTK +LQLVGVGYR +QVIGQVAADLR +LIDQSTAEIVETAK +GPIPLPTR +FTVLISPHVNK +LVDIVEPTEK +LDLAAGVDVQISLG +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +QGNALGWATAGGSGFR +STPFAAQVAAER +ALNAAGFR +MATVNQLVR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAENVK +ISELSEEQIDTLR +FVVEGDLR +IAGINIPDQK +HAVIALTSIYGVGK +AILAAAGIAENVK +ISELSEEQIDTLR +FVVEGDLR +AIISDVNATDEDR +QTGRPHAFLR +MSLSTEATAK +SIVVAIER +GPFIDLHLLK +STIFPNMIGLTIAVHNGR +QHVPVFVSDEMVGHK +LGEFAPTR +AGVHFGHQTR +MKPFIFGAR +VHIINLEK +TVPMFNEALAELNK +WLGGMLTNWK +DLETQSQDGTFEK +LENSLGGIK +AVSLYLGAVAATVR +SQDLASQAEESFVEAE +LGIVKPWNSTWFANTK +EFADNLDSDFK +IVIERPAK +VTIHTARPGIVIGK +VVADIAGVPAQINIAEVR +LVADSITSQLER +LGGAEIAR +ADIDYNTSEAHTTYGVIGVK +EGTDLFLK +IGQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +EGTDLFLK +IEQAPGQHGAR +LSDYGVQLR +GNTGENLLALLEGR +VVNIASYQVSPNDVVSIR +AALELAEQR +EKPTWLEVDAGK +SDLSADINEHLIVELYSK +QAGELQEK +IFSFTALTVVGDGNGR +EVPAAIQK +NMINVALNNGTLQHPVK +VFMQPASEGTGIIAGGAMR +AVLEVAGVHNVLAK +AYGSTNPINVVR +ATIDGLENMNSPEMVAAK +SVEEILGK +FGSELLAK +FVNILMVDGK +STAESIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAAENK +FGSELLAK +FVNILMVDGK +STAESIVYSALETLAQR +SELEAFEVALENVRPTVEVK +VGGSTYQVPVEVRPVR +LANELSDAADNK +MSMQDPIADMLTR +AAVTMPSSK +VAIANVLK +EEGFIEDFK +VEGDTKPELELTLK +AVVESIQR +VMAGLGIAVVSTSK +MAENQYYGTGR +VFIKPGNGK +SLEQYFGR +QPLELVDMVEK +LDLYITVK +GGGISGQAGAIR +ALMEYDESLR diff --git a/image_ref/fasta/optimal peptide set/Salmonella enterica.parquet b/image_ref/fasta/optimal peptide set/Salmonella enterica.parquet new file mode 100644 index 0000000000000000000000000000000000000000..a6cf9e0a1cb55a3ef73c777798c2181120b42ea7 Binary files /dev/null and b/image_ref/fasta/optimal peptide set/Salmonella enterica.parquet differ diff --git a/image_ref/fasta/optimal peptide set/Serratia marcescens.fasta b/image_ref/fasta/optimal peptide set/Serratia marcescens.fasta new file mode 100644 index 0000000000000000000000000000000000000000..268591e53348dd8c9da78d70066fc0e64569fae9 --- /dev/null +++ b/image_ref/fasta/optimal peptide set/Serratia marcescens.fasta @@ -0,0 +1,852 @@ +TEFDVILK +GATGLGLK +DLVESAPAALK +SLEEAGAEVEVK +NMAGSLVR +VVEPLITLAK +LFNELGPR +AGDNAPMAYIELVDR +AESQAEVATAE +QLEQEQMK +QDVPAFRPGDSVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVIDSITVK +QLEQEQMK +QDVPAFRPGDSVEVK +VWVVEGSK +LQAFEGVVIAIR +GLHSAFTVR +ISNGEGVER +VFQTHSPVIDSIAVK +VAFQAVIK +QNGLSYSK +ILADIAVFDK +VAFGALVEK +MYAVFQSGGK +VSEGQTVR +IGVPFVDGGK +AEVVAHGR +MFTINVEVR +FPAIVYGGK +EAAVSIELDHDSVK +NMEAKPEFYSEAVTLVIDGK +LAHIDFVR +MFTINAEVR +FPAIVYGGK +EAAVSIELDHDSVK +NMEAKPEFYSEAVTLVIDGK +LAHIDFVR +FGGEAVLAGSIIVR +DHTLFALK +RPVSGNNR +SHAMNATK +FLPNLHSHR +GIETVLADLR +MAVQQNKPTR +SHDALTTTTLSVDK +HHITADGFYR +LVSSAGTGHFYTTTK +TFQPSVLK +MQVLSSLR +MQVILLDK +VANLGSLGDQVNVK +NFLVPQGK +NVEFFEAR +LADVLAAAEAR +INELGSVTIASK +LFGSIGTR +DIADAVTAAGVEVAK +RPFYQVVVTDSR +VGFFNPIASGQAEALR +IEHWVGLGATVSDR +FTAEGVQEIDYK +NYITESGK +YLSLLPYTDR +VDAAIAAGDK +EAAQNAFLVMQPLVDR +VDAAIAAGDK +EAAQTAFLVMQPLVDR +ENEPFDVALR +AGVLAEVR +EFYEKPTTER +YSATITNAQGQIHR +QLAYPINK +HAVTEASPMVK +EDFANETADDADAGDSEE +GVNVLADAVK +SFGAPTITK +FENMGAQMVK +AVAAGMNPMDLK +AVVAAVEELK +AIAQVGTISANSDETVGK +LIAEAMEK +EMLPVLEAVAK +ATLEDLGQAK +DTTIIIDGVGDEATIQGR +QQIEEATSDYDR +LAGGVAVIK +VGAATEVEMK +VEDALHATR +AAVEEGVVAGGGVALIR +GDNEDQNVGIK +QIVVNAGEEASVIANQVK +MSIRPLHDR +SAGGIVLTGSAAGK +GEVVAVGK +VLENGNIQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MSIRPLHDR +SAGGIVLTGSAAGK +GEVVAVGK +VLESGNIQPLDVK +VGDIVIFNDGYGVK +IDNEEVLIMSESDILAIVEA +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +LGEPVFDVK +GVTFSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFDK +LQMELVPER +GETASFDIEANGK +DDIQSIEVPVEYIAGK +IETLFTNDLDHGAYISETLR +LSSLVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGVIQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLTEELQILEAGLFAR +IHAVLVAGGIEADK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +VDLNTFSDDEVLR +GMPIATPVFDGAK +LLEMGGIPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +NIVDGDHR +MEPGMPESFNVLLK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +LGEPVFDVK +GVTFSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFDK +LQMELVPER +GETASFDIEANGK +DDIQSIEVPVEYIAGK +IETLFTNDLDHGAYISETLR +LSSLVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGVIQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLTEELQILEAGLFAR +IHAVLVAGGIEADK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +VDLNTFSDDEVLR +GMPIATPVFDGAK +QLLEMGGIPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +NIVDGDHR +MEPGMPESFNVLLK +SLGINIELEDE +MVYSYTEK +RPQVLDIPYLLSIQLDSFQK +FIEQDPEGQYGLEAAFR +SVFPIQSYSGNSELQYVSYR +LGEPVFDVK +GVTFSAPLR +EAPEGTVK +VIVSQLHR +SPGVFFDSDK +GSWLDFEFDPK +LPATIILR +ALNYTTEQILDLFFDK +LQMELVPER +GETASFDIEANGK +DDIQSIEVPVEYIAGK +IETLFTNDLDHGAYISETLR +LSSLVEIYR +MMRPGEPPTR +EAAESLFENLFFSEDR +YDLSAVGR +DEIEGSGILSK +DDIIEVMK +GEVDDIDHLGNR +SVGEMAENQFR +ISALGPGGLTR +DVHPTHYGR +GESSLFSR +ALMGANMQR +ADKPLVGTGMER +AVAVDSGVTAVAK +GGVIQYVDASR +VNEDEMYPGEAGIDIYNLTK +VAFMPWNGYNFEDSILVSER +LGPEEITADIPNVGEAALSK +GETQLTPEEK +VPNGVSGTVIDVQVFTR +ALEIEEMQLK +DLTEELQILEAGLFAR +IHAVLVAGGIEADK +WLELGLTDEEK +QNQLEQLAEQYDELK +ITQGDDLAPGVLK +MNIGQILETHLGMAAK +VDLNTFSDDEVLR +GMPIATPVFDGAK +LLEMGGIPTSGQITLFDGR +QVTVGYMYMLK +LNHLVDDK +STGSYSLVTQQPLGGK +NIVDGDHR +MEPGMPESFNVLLK +SLGINIELEDE +NFSIIAHIDHGK +EMAAQVLDSMDLER +AQSVTLDYK +IDLPAADPDR +AAQEIEDIVGIDATDAVR +TGVGVPEVLER +VMSTGQVYNADR +DILGAPVGDTLTQAR +EVIYVDSPSK +LPPLNNIQELR +GYASLDYNFK +FQASDMVR +VDVLINNER +VDALALITHR +QQFDIAIQAAIGTHIIAR +QVGNVELPQEAFLAILHVGK +NFSIIAHIDHGK +EMAAQVLDSMDLER +AQSVTLDYK +IDLPAADPDR +AAQEIEDIVGIDATDAVR +TGVGVPDVLER +VMSTGQVYNADR +DILGAPVGDTLTQAR 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