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b/data/processed_data_wiff/npy_image/train_data/Salmonella enterica/SALENT9_ANA.npy differ diff --git a/image_ref/dataset_ref.py b/image_ref/dataset_ref.py index 51aa24ee3c0faa4a48664b09b43f5229a790729b..c48992f6b1e3b0de54b312ca3d38aa2b55915f52 100644 --- a/image_ref/dataset_ref.py +++ b/image_ref/dataset_ref.py @@ -34,8 +34,23 @@ class Log_normalisation: def __call__(self, x): return torch.log(x+1+self.epsilon)/torch.log(torch.max(x)+1+self.epsilon) -class Random_shift_rt(): - pass +class Random_shift_rt: + def __init__(self, max_cycle=5): + self.max_cycle = max_cycle + + def __call__(self, x): + pass + +class Intensity_shift: + def __init__(self, min_ratio=0.1, max_ratio = 10): + self.min_ratio = min_ratio + self.max_ratio = max_ratio + + def __call__(self, x): + + intensity_ratio_map = torch.rand(x.shape()) + return torch.mul(x,intensity_ratio_map) + def default_loader(path): diff --git a/image_ref/main.py b/image_ref/main.py index a06cac935b56c34d4f25fa1bad81ccd1a951490b..f33a63b230f39fd8e6163c222529c00125143d50 100644 --- a/image_ref/main.py +++ b/image_ref/main.py @@ -178,7 +178,7 @@ def run_duo(args): args.base_out+'confidence_matrix_.png') make_prediction_duo(model, data_val_batch,args.base_out+'_confusion_matrix_val.png', - args.base_out+'_confusion_matrix_val.png') + args.base_out+'_confidence_matrix_val.png') if args.wandb is not None: wdb.finish() diff --git a/output/all_data_top_7_classes/resnet18_contrastive_prop_30_confusion_matrix_val.png b/output/all_data_top_7_classes/resnet18_contrastive_prop_30_confusion_matrix_val.png deleted file mode 100644 index 54b5faa3c2538207f05c2139f457932fccfe24ae..0000000000000000000000000000000000000000 Binary files a/output/all_data_top_7_classes/resnet18_contrastive_prop_30_confusion_matrix_val.png and /dev/null differ