From 056e6ec966a13f4619adf9a703929fb523630a9a Mon Sep 17 00:00:00 2001
From: George Marchment <georgemarchment@yahoo.fr>
Date: Fri, 21 Mar 2025 14:43:20 +0100
Subject: [PATCH] Added error filter in DSL1 converter -> catches a strange
thing
---
src/process.py | 2 ++
1 file changed, 2 insertions(+)
diff --git a/src/process.py b/src/process.py
index 40f8f76..c82cac1 100644
--- a/src/process.py
+++ b/src/process.py
@@ -462,6 +462,8 @@ class Process(Nextflow_Building_Blocks):
#code = process_2_DSL2(code)
lines = []
for line in code.split("\n"):
+ if(" def " in " "+line):
+ raise BioFlowInsightError(f"[DSL1 converter error] Do not recognise the input '{line.strip()}' in the process '{self.get_name()}'. Try rewritting it in a different way.")
temp = process_2_DSL2(line.split(" from ")[0])
lines.append(temp)
#TODO -> need to determine if it's on it's own is it either a path or val
--
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