From 0d378be21ffc7eb9fd89c56a6ab5d625aaf4a168 Mon Sep 17 00:00:00 2001
From: George Marchment <georgemarchment@yahoo.fr>
Date: Thu, 7 Mar 2024 10:56:50 +0100
Subject: [PATCH] fix
---
src/workflow.py | 15 ++++++++++-----
1 file changed, 10 insertions(+), 5 deletions(-)
diff --git a/src/workflow.py b/src/workflow.py
index 6b9e175..5961369 100644
--- a/src/workflow.py
+++ b/src/workflow.py
@@ -32,13 +32,18 @@ class Workflow:
self.set_address()
self.dico = {}
self.get_dico()
-
- def fill_log(self):
+
+ def get_repo_adress(self):
current_directory = os.getcwd()
repo = "/".join(self.nextflow_file.get_file_address().split("/")[:-1])
if(repo==''):
repo = current_directory
- os.chdir(repo)
+ return repo
+
+
+ def fill_log(self):
+ current_directory = os.getcwd()
+ os.chdir(self.get_repo_adress())
try:
os.system(f"git log --reverse > temp_{id(self)}.txt")
with open(f'temp_{id(self)}.txt') as f:
@@ -53,7 +58,7 @@ class Workflow:
def set_address(self):
current_directory = os.getcwd()
- os.chdir("/".join(self.nextflow_file.get_file_address().split("/")[:-1]))
+ os.chdir(self.get_repo_adress())
try:
os.system(f"git ls-remote --get-url origin > temp_address_{id(self)}.txt")
with open(f'temp_address_{id(self)}.txt') as f:
@@ -67,7 +72,7 @@ class Workflow:
def get_dico(self):
current_directory = os.getcwd()
- os.chdir("/".join(self.nextflow_file.get_file_address().split("/")[:-1]))
+ os.chdir(self.get_repo_adress())
try:
_ = os.system(f"wget -qO - https://api.github.com/repos/{self.address} > temp_dico_{id(self)}.json")
with open(f'temp_dico_{id(self)}.json') as json_file:
--
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