diff --git a/bioflow_insight_cli/main.py b/bioflow_insight_cli/main.py index be9fdb451685a01b205926d32d79eaca953cd994..1ce525fdc8b4e26e372b63e68b91b2606d5a0363 100644 --- a/bioflow_insight_cli/main.py +++ b/bioflow_insight_cli/main.py @@ -1,6 +1,6 @@ import click -from src.nextflow_file import Nextflow_File +from src.workflow import Workflow @click.command() @@ -36,7 +36,7 @@ def cli(main_workflow_path, render_graphs: bool, **kwargs): in folders with eponymous names. """ - w = Nextflow_File(address=main_workflow_path, **kwargs) + w = Workflow(address=main_workflow_path, **kwargs) w.initialise() w.generate_all_graphs(render_graphs=render_graphs)