diff --git a/run_tests.py b/run_tests.py
index df6b6575c7a89ed4e343f9af7231597a9d0c1a34..9cb454f0e1111b6c53539beb0b93ba6bcf9141ee 100755
--- a/run_tests.py
+++ b/run_tests.py
@@ -29,8 +29,7 @@ class TestWorkflows(unittest.TestCase):
def test_wf{num}_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/{num}", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/{num}/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/{num}/specification_graph.json'))
"""
script+=text
@@ -38,8 +37,153 @@ class TestWorkflows(unittest.TestCase):
with open("./tests/test_workflows_simple_duplicate.py", "w") as text_file:
text_file.write(script)
+def write_executions_extraction_test():
+ #I'm gonna automatically write the tests before running them
+ script = """import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_All_Executors_Extraction(unittest.TestCase):
+ """
+
+ workflows = glob.glob(f'./tests/ressources/workflows/*', recursive=False)
+ for wf in workflows:
+ num = wf.split("/")[-1]
+ text=f"""
+ def test_{num}_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/{num}", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/{num}/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {{}}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+ """
+
+ script+=text
+
+ with open("./tests/test_workflows_all_executors.py", "w") as text_file:
+ text_file.write(script)
+
+def write_process_extraction_test():
+ #I'm gonna automatically write the tests before running them
+ script = """import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_Process_Extraction(unittest.TestCase):
+ """
+
+ workflows = glob.glob(f'./tests/ressources/workflows/*', recursive=False)
+ for wf in workflows:
+ num = wf.split("/")[-1]
+ text=f"""
+ def test_{num}_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/{num}", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/{num}/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {{}}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+ """
+
+ script+=text
+
+ with open("./tests/test_process_extraction.py", "w") as text_file:
+ text_file.write(script)
+
+def write_subworkflow_extraction_test():
+ #I'm gonna automatically write the tests before running them
+ script = """import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_Subworkflow_Extraction(unittest.TestCase):
+ """
+
+ workflows = glob.glob(f'./tests/ressources/workflows/*', recursive=False)
+ for wf in workflows:
+ num = wf.split("/")[-1]
+ text=f"""
+ def test_{num}_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/{num}", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/{num}/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {{}}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+ """
+
+ script+=text
+
+ with open("./tests/test_subworkflow_extraction.py", "w") as text_file:
+ text_file.write(script)
+
+def write_executor_extraction_per_subworkflow_test():
+ #I'm gonna automatically write the tests before running them
+ script = """import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_Executor_Extraction_Per_Subworkflow(unittest.TestCase):
+ """
+
+ workflows = glob.glob(f'./tests/ressources/workflows/*', recursive=False)
+ for wf in workflows:
+ num = wf.split("/")[-1]
+ text=f"""
+ def test_{num}_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/{num}", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/{num}/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {{}}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+ """
+
+ script+=text
+
+ with open("./tests/test_executor_extraction_per_subworkflow.py", "w") as text_file:
+ text_file.write(script)
+
if __name__ == '__main__':
write_duplicate_test()
+ write_executions_extraction_test()
+ write_process_extraction_test()
+ write_subworkflow_extraction_test()
+ write_executor_extraction_per_subworkflow_test()
sys.exit(0 if main(*sys.argv[1:]) else 1)
diff --git a/src/graph.py b/src/graph.py
index 2023eef66d8f0922a58457d2655d85c906973c45..44b3d192e2a3d7e9bc6607b81e4b2c85a29a84b0 100644
--- a/src/graph.py
+++ b/src/graph.py
@@ -90,6 +90,9 @@ class Graph():
self.dico_flattened["subworkflows"] = []
+ def get_full_dico(self):
+ return self.full_dico
+
def is_initialised(self):
return self.initialised
@@ -136,8 +139,8 @@ class Graph():
if(self.link_dico==None):
self.link_dico = initia_link_dico_rec(self.full_dico)
- def get_specification_graph(self, filename = "specification_graph", render_graphs = True):
- generate_graph(self.get_output_dir()/'graphs'/filename, self.full_dico, render_graphs = render_graphs)
+ def get_specification_graph(self, dirc = 'graphs', filename = "specification_graph", render_graphs = True):
+ generate_graph(self.get_output_dir()/ dirc /filename, self.full_dico, render_graphs = render_graphs)
def get_specification_graph_wo_labels(self, filename = "specification_graph_wo_labels", render_graphs = True):
generate_graph(self.get_output_dir()/'graphs'/filename, self.full_dico, label_edge=False, label_node=False, render_graphs = render_graphs)
diff --git a/src/root.py b/src/root.py
index 2e92e8d21d6214d3b9cab6552c0931ea4138a3be..763f8aa31f0422c1c7174ed962d48bbb6a170bf8 100644
--- a/src/root.py
+++ b/src/root.py
@@ -164,8 +164,8 @@ class Root(Nextflow_Building_Blocks):
b.get_inside_executors_rec(dico)
return list(dico.keys())
- def get_all_executors_from_workflow(self):
- return self.get_executors_same_level()+self.get_inside_executors()
+ #def get_all_executors_from_workflow(self):
+ # return self.get_executors_same_level()+self.get_inside_executors()
#def get_calls(self):
# tab = []
diff --git a/src/workflow.py b/src/workflow.py
index fdef4b13ce9c04c02413333e5cc9c55d29c1d61d..4e0e863420bba0f06e03403f4522f019aaaf1ca9 100644
--- a/src/workflow.py
+++ b/src/workflow.py
@@ -201,7 +201,59 @@ George Marchment, Bryan Brancotte, Marie Schmit, Frédéric Lemoine, Sarah Cohen
self.iniatilise_tab_processes_2_remove()
return self.graph.check_if_equal(file, processes_2_remove = self.processes_2_remove)
+ ###########################
+ # Generate test data
+ ###########################
+ #These are the methods which generate the test data
+
+ def generate_test_specification_graph(self):
+ dico = self.graph.get_full_dico()
+ with open(self.get_output_dir()/ 'test' /"specification_graph.json", "w") as outfile:
+ json.dump(dico, outfile, indent = 4)
+
+ def generate_all_executors(self):
+ executors = self.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+ with open(self.get_output_dir()/ 'test' /"all_executors.json", "w") as outfile:
+ json.dump(dico, outfile, indent = 4)
+
+ def generate_executors_per_subworkflows(self):
+ subs = self.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ dico[str(s)]= {}
+ executors = s.get_all_executors_in_workflow()
+ for e in executors:
+ dico[str(s)][str(e)] = e.get_code(get_OG = True)
+ with open(self.get_output_dir()/ 'test' /"executors_per_subworkflows.json", "w") as outfile:
+ json.dump(dico, outfile, indent = 4)
+
+ def generate_all_processes(self):
+ processes = self.get_processes_called()
+ dico= {}
+ for p in processes:
+ dico[str(p)] = p.get_code()
+ with open(self.get_output_dir()/ 'test' /"all_processes.json", "w") as outfile:
+ json.dump(dico, outfile, indent = 4)
+
+ def generate_all_subworkflows(self):
+ subs = self.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ dico[str(s)] = s.get_code()
+ with open(self.get_output_dir()/ 'test' /"all_subworkflows.json", "w") as outfile:
+ json.dump(dico, outfile, indent = 4)
+
+ def generate_all_test_data(self):
+ self.generate_test_specification_graph()
+ self.generate_all_executors()
+ self.generate_all_processes()
+ self.generate_all_subworkflows()
+ self.generate_executors_per_subworkflows()
+
#Returns a dico of number of processes called per each condition
@@ -293,7 +345,7 @@ George Marchment, Bryan Brancotte, Marie Schmit, Frédéric Lemoine, Sarah Cohen
#TODO -> update the operations -> also consider the operations in the params of the calls which need to be updated
- for o in self.get_workflow_main().root.get_all_executors_from_workflow():
+ for o in self.get_workflow_main().get_all_executors_in_workflow():
if(o.get_type()=="Operation"):
code = code.replace(o.get_code(get_OG=True), o.convert_to_DSL2())
else:
@@ -435,6 +487,14 @@ George Marchment, Bryan Brancotte, Marie Schmit, Frédéric Lemoine, Sarah Cohen
if(ele.get_type()=="Subworkflow"):
subs.append(ele)
return subs
+
+ def get_processes_called(self):
+ subs = []
+ for c in self.get_workflow_main().get_all_calls_in_workflow():
+ ele = c.get_first_element_called()
+ if(ele.get_type()=="Process"):
+ subs.append(ele)
+ return subs
def rewrite_and_initialise(self, code):
diff --git a/tests/ressources/workflows/wf1/all_executors.json b/tests/ressources/workflows/wf1/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..4c29e68b92f4bb42b045438f1e97a86b7ba117c5
--- /dev/null
+++ b/tests/ressources/workflows/wf1/all_executors.json
@@ -0,0 +1,12 @@
+{
+ "Call_124185449263312": "sub2()",
+ "Call_124185449266912": "sub3()",
+ "Call_124185450586384": "M1()",
+ "Call_124185450591088": "M2(M1.out)",
+ "Call_124185449161792": "M1()",
+ "Call_124185449333136": "M2(M1.out)",
+ "Call_124185450583648": "sub1()",
+ "<src.operation.Operation object at 0x70f22dacb8e0>": "sub1.out.view()",
+ "Call_124185449045184": "sub1()",
+ "<src.operation.Operation object at 0x70f22da43040>": "sub1.out.view()"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf1/all_processes.json b/tests/ressources/workflows/wf1/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..ce51abebf998826ee991986048966db3dc5f246a
--- /dev/null
+++ b/tests/ressources/workflows/wf1/all_processes.json
@@ -0,0 +1,6 @@
+{
+ "<src.process.Process object at 0x70f22dac9210>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22dacb5b0>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22d925bd0>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22d927f10>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf1/all_subworkflows.json b/tests/ressources/workflows/wf1/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..92ac376ebab6673f40a8d4d7f6d986ec382c40dd
--- /dev/null
+++ b/tests/ressources/workflows/wf1/all_subworkflows.json
@@ -0,0 +1,6 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22dab2770>": "workflow sub1 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M1.out\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22d93a5c0>": "workflow sub1 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M1.out\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22d96fca0>": "workflow sub2 {\n main:\n sub1()\n sub1.out.view()\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22d93a410>": "workflow sub3 {\n main:\n sub1()\n sub1.out.view()\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf1/executors_per_subworkflows.json b/tests/ressources/workflows/wf1/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..f2c966b41b26127c8eebe009d0c0fbe2486626a4
--- /dev/null
+++ b/tests/ressources/workflows/wf1/executors_per_subworkflows.json
@@ -0,0 +1,22 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22dab2770>": {
+ "Call_124185450586384": "M1()",
+ "Call_124185450591088": "M2(M1.out)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22d93a5c0>": {
+ "Call_124185449161792": "M1()",
+ "Call_124185449333136": "M2(M1.out)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22d96fca0>": {
+ "Call_124185450583648": "sub1()",
+ "<src.operation.Operation object at 0x70f22dacb8e0>": "sub1.out.view()",
+ "Call_124185450586384": "M1()",
+ "Call_124185450591088": "M2(M1.out)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22d93a410>": {
+ "Call_124185449045184": "sub1()",
+ "<src.operation.Operation object at 0x70f22da43040>": "sub1.out.view()",
+ "Call_124185449161792": "M1()",
+ "Call_124185449333136": "M2(M1.out)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf1/specification_graph.json b/tests/ressources/workflows/wf1/specification_graph.json
index 2eb338d86db0336c884ae1f594c2fc918557756c..258873ec3328271fc1d62ccd3372e1ce3f4543b3 100644
--- a/tests/ressources/workflows/wf1/specification_graph.json
+++ b/tests/ressources/workflows/wf1/specification_graph.json
@@ -5,7 +5,7 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.operation.Operation object at 0x786a10c39fc0>",
+ "id": "<src.operation.Operation object at 0x70f22dacb8e0>",
"name": "",
"shape": "point",
"xlabel": "sub1.out.view()",
@@ -14,8 +14,8 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x786a10c399f0>",
- "B": "<src.operation.Operation object at 0x786a10c39fc0>",
+ "A": "<src.operation.Operation object at 0x70f289390070>",
+ "B": "<src.operation.Operation object at 0x70f22dacb8e0>",
"label": "sub1.out"
}
],
@@ -23,28 +23,28 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x786a10c394e0>",
+ "id": "<src.process.Process object at 0x70f22dac9210>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x786a10c395a0>",
+ "id": "<src.process.Process object at 0x70f22dacb5b0>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x786a10c39420>",
+ "id": "<src.operation.Operation object at 0x70f22dacbf40>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x786a10c399f0>",
+ "id": "<src.operation.Operation object at 0x70f289390070>",
"name": "",
"shape": "point",
"xlabel": "emit: M1.out",
@@ -53,18 +53,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x786a10c394e0>",
- "B": "<src.operation.Operation object at 0x786a10c39420>",
+ "A": "<src.process.Process object at 0x70f22dac9210>",
+ "B": "<src.operation.Operation object at 0x70f22dacbf40>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x786a10c39420>",
- "B": "<src.process.Process object at 0x786a10c395a0>",
+ "A": "<src.operation.Operation object at 0x70f22dacbf40>",
+ "B": "<src.process.Process object at 0x70f22dacb5b0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x786a10c394e0>",
- "B": "<src.operation.Operation object at 0x786a10c399f0>",
+ "A": "<src.process.Process object at 0x70f22dac9210>",
+ "B": "<src.operation.Operation object at 0x70f289390070>",
"label": "M1.out"
}
],
@@ -75,7 +75,7 @@
"sub3_0": {
"nodes": [
{
- "id": "<src.operation.Operation object at 0x786a10c3a770>",
+ "id": "<src.operation.Operation object at 0x70f22da43040>",
"name": "",
"shape": "point",
"xlabel": "sub1.out.view()",
@@ -84,8 +84,8 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x786a10c3a560>",
- "B": "<src.operation.Operation object at 0x786a10c3a770>",
+ "A": "<src.operation.Operation object at 0x70f22d9561a0>",
+ "B": "<src.operation.Operation object at 0x70f22da43040>",
"label": "sub1.out"
}
],
@@ -93,28 +93,28 @@
"sub1_1": {
"nodes": [
{
- "id": "<src.process.Process object at 0x786a10c3a4a0>",
+ "id": "<src.process.Process object at 0x70f22d925bd0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x786a10c39f00>",
+ "id": "<src.process.Process object at 0x70f22d927f10>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x786a10c3a500>",
+ "id": "<src.operation.Operation object at 0x70f22d926c50>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x786a10c3a560>",
+ "id": "<src.operation.Operation object at 0x70f22d9561a0>",
"name": "",
"shape": "point",
"xlabel": "emit: M1.out",
@@ -123,18 +123,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x786a10c3a4a0>",
- "B": "<src.operation.Operation object at 0x786a10c3a500>",
+ "A": "<src.process.Process object at 0x70f22d925bd0>",
+ "B": "<src.operation.Operation object at 0x70f22d926c50>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x786a10c3a500>",
- "B": "<src.process.Process object at 0x786a10c39f00>",
+ "A": "<src.operation.Operation object at 0x70f22d926c50>",
+ "B": "<src.process.Process object at 0x70f22d927f10>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x786a10c3a4a0>",
- "B": "<src.operation.Operation object at 0x786a10c3a560>",
+ "A": "<src.process.Process object at 0x70f22d925bd0>",
+ "B": "<src.operation.Operation object at 0x70f22d9561a0>",
"label": "M1.out"
}
],
diff --git a/tests/ressources/workflows/wf10/all_executors.json b/tests/ressources/workflows/wf10/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..a41a81d21669aefc0d48fcb748d25f645a3ff684
--- /dev/null
+++ b/tests/ressources/workflows/wf10/all_executors.json
@@ -0,0 +1,5 @@
+{
+ "Call_124185448873504": "M2(M1.out)",
+ "Call_124185450888880": "M1()",
+ "Call_124185448859584": "M1()"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf10/all_processes.json b/tests/ressources/workflows/wf10/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..78307731eb4d869876cbba262d2b1769f4810399
--- /dev/null
+++ b/tests/ressources/workflows/wf10/all_processes.json
@@ -0,0 +1,5 @@
+{
+ "<src.process.Process object at 0x70f22dafa9e0>": "process M2 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22dafa200>": "process M1 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22dafbf10>": "process M1 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf10/all_subworkflows.json b/tests/ressources/workflows/wf10/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf10/all_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf10/executors_per_subworkflows.json b/tests/ressources/workflows/wf10/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf10/executors_per_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf10/specification_graph.json b/tests/ressources/workflows/wf10/specification_graph.json
index e34b9d597e8d8b90456bfd68372d239f859c912f..e3bd9f46a86d370df679c5bd51282ec43b87f2b1 100644
--- a/tests/ressources/workflows/wf10/specification_graph.json
+++ b/tests/ressources/workflows/wf10/specification_graph.json
@@ -1,28 +1,28 @@
{
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a494c70>",
+ "id": "<src.process.Process object at 0x70f22dafa200>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a496ce0>",
+ "id": "<src.process.Process object at 0x70f22dafbf10>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a4950f0>",
+ "id": "<src.process.Process object at 0x70f22dafa9e0>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a497700>",
+ "id": "<src.operation.Operation object at 0x70f22daf9e10>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
@@ -31,18 +31,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a494c70>",
- "B": "<src.operation.Operation object at 0x71ee1a497700>",
+ "A": "<src.process.Process object at 0x70f22dafa200>",
+ "B": "<src.operation.Operation object at 0x70f22daf9e10>",
"label": "M1.out"
},
{
- "A": "<src.process.Process object at 0x71ee1a496ce0>",
- "B": "<src.operation.Operation object at 0x71ee1a497700>",
+ "A": "<src.process.Process object at 0x70f22dafbf10>",
+ "B": "<src.operation.Operation object at 0x70f22daf9e10>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a497700>",
- "B": "<src.process.Process object at 0x71ee1a4950f0>",
+ "A": "<src.operation.Operation object at 0x70f22daf9e10>",
+ "B": "<src.process.Process object at 0x70f22dafa9e0>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf11/all_executors.json b/tests/ressources/workflows/wf11/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..168b609596dc2d637251f51c56873b187963c936
--- /dev/null
+++ b/tests/ressources/workflows/wf11/all_executors.json
@@ -0,0 +1,5 @@
+{
+ "<src.operation.Operation object at 0x70f2e278ba60>": "a = M1()",
+ "<src.operation.Operation object at 0x70f22db13670>": "a = Channel.empty()",
+ "Call_124185450985744": "M2(a)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf11/all_processes.json b/tests/ressources/workflows/wf11/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..c15832f084395f8923eefbca6e3aec95bd868fb0
--- /dev/null
+++ b/tests/ressources/workflows/wf11/all_processes.json
@@ -0,0 +1,4 @@
+{
+ "<src.process.Process object at 0x70f22db13280>": "process M1 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db13b80>": "process M2 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf11/all_subworkflows.json b/tests/ressources/workflows/wf11/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf11/all_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf11/executors_per_subworkflows.json b/tests/ressources/workflows/wf11/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf11/executors_per_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf11/specification_graph.json b/tests/ressources/workflows/wf11/specification_graph.json
index 62ec257161aeaa8bb547e315fb0f9677483e5b5b..8d97f3e6af9b7e3ba6aa6245f1dc447f07dd2afa 100644
--- a/tests/ressources/workflows/wf11/specification_graph.json
+++ b/tests/ressources/workflows/wf11/specification_graph.json
@@ -1,35 +1,35 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a48e440>",
+ "id": "<src.operation.Operation object at 0x70f2e278ba60>",
"name": "",
"shape": "point",
"xlabel": "a = M1()",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a48fb50>",
+ "id": "<src.process.Process object at 0x70f22db13280>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48fac0>",
+ "id": "<src.operation.Operation object at 0x70f22db13670>",
"name": "",
"shape": "point",
"xlabel": "a = Channel.empty()",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a48ed40>",
+ "id": "<src.process.Process object at 0x70f22db13b80>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48fa60>",
+ "id": "<src.operation.Operation object at 0x70f22db134c0>",
"name": "",
"shape": "point",
"xlabel": "a",
@@ -38,23 +38,23 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a48fb50>",
- "B": "<src.operation.Operation object at 0x71ee1a48e440>",
+ "A": "<src.process.Process object at 0x70f22db13280>",
+ "B": "<src.operation.Operation object at 0x70f2e278ba60>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a48e440>",
- "B": "<src.operation.Operation object at 0x71ee1a48fa60>",
+ "A": "<src.operation.Operation object at 0x70f2e278ba60>",
+ "B": "<src.operation.Operation object at 0x70f22db134c0>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a48fac0>",
- "B": "<src.operation.Operation object at 0x71ee1a48fa60>",
+ "A": "<src.operation.Operation object at 0x70f22db13670>",
+ "B": "<src.operation.Operation object at 0x70f22db134c0>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a48fa60>",
- "B": "<src.process.Process object at 0x71ee1a48ed40>",
+ "A": "<src.operation.Operation object at 0x70f22db134c0>",
+ "B": "<src.process.Process object at 0x70f22db13b80>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf12/all_executors.json b/tests/ressources/workflows/wf12/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..ad7c83c35846911688fa44d74b458d8925877b3a
--- /dev/null
+++ b/tests/ressources/workflows/wf12/all_executors.json
@@ -0,0 +1,7 @@
+{
+ "<src.operation.Operation object at 0x70f22da400d0>": "b = sub1.out.a",
+ "Call_124185451105920": "sub1()",
+ "Call_124185448857952": "sub2(b)",
+ "<src.operation.Operation object at 0x70f22d927e20>": "a = M1()",
+ "Call_124185450917040": "M2(b)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf12/all_processes.json b/tests/ressources/workflows/wf12/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..29c5df2ffead45d18ad83d5e693e2703c2679af7
--- /dev/null
+++ b/tests/ressources/workflows/wf12/all_processes.json
@@ -0,0 +1,4 @@
+{
+ "<src.process.Process object at 0x70f22d9270a0>": "process M1 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db00b50>": "process M2 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf12/all_subworkflows.json b/tests/ressources/workflows/wf12/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..2c314d14d034de1498bb91db026a381b5b1d3472
--- /dev/null
+++ b/tests/ressources/workflows/wf12/all_subworkflows.json
@@ -0,0 +1,4 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22d90d300>": "workflow sub1 {\n main:\n a = M1()\n\n emit:\n a\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db03f10>": "workflow sub2 {\n\n take:\n b\n\n main:\n M2(b)\n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf12/executors_per_subworkflows.json b/tests/ressources/workflows/wf12/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..82663fdddf3d975e63c3390c785340a899204c8e
--- /dev/null
+++ b/tests/ressources/workflows/wf12/executors_per_subworkflows.json
@@ -0,0 +1,8 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22d90d300>": {
+ "<src.operation.Operation object at 0x70f22d927e20>": "a = M1()"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db03f10>": {
+ "Call_124185450917040": "M2(b)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf12/specification_graph.json b/tests/ressources/workflows/wf12/specification_graph.json
index 595f78cf2224ee8dee7b03b6273a9419d5b88fbf..84804a63fe59b71c533521e06315c9f196c3429d 100644
--- a/tests/ressources/workflows/wf12/specification_graph.json
+++ b/tests/ressources/workflows/wf12/specification_graph.json
@@ -1,14 +1,14 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a4963b0>",
+ "id": "<src.operation.Operation object at 0x70f22da400d0>",
"name": "",
"shape": "point",
"xlabel": "b = sub1.out.a",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a285210>",
+ "id": "<src.operation.Operation object at 0x70f22db006d0>",
"name": "",
"shape": "point",
"xlabel": "b",
@@ -17,18 +17,18 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a2cb730>",
- "B": "<src.operation.Operation object at 0x71ee1a4963b0>",
+ "A": "<src.operation.Operation object at 0x70f22d925a80>",
+ "B": "<src.operation.Operation object at 0x70f22da400d0>",
"label": "sub1.out.a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4963b0>",
- "B": "<src.operation.Operation object at 0x71ee1a285210>",
+ "A": "<src.operation.Operation object at 0x70f22da400d0>",
+ "B": "<src.operation.Operation object at 0x70f22db006d0>",
"label": "b"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a285210>",
- "B": "<src.operation.Operation object at 0x71ee1a2ca380>",
+ "A": "<src.operation.Operation object at 0x70f22db006d0>",
+ "B": "<src.operation.Operation object at 0x70f22db02c80>",
"label": ""
}
],
@@ -36,21 +36,21 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a496b90>",
+ "id": "<src.operation.Operation object at 0x70f22d927e20>",
"name": "",
"shape": "point",
"xlabel": "a = M1()",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a2ca230>",
+ "id": "<src.process.Process object at 0x70f22d9270a0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a2cb730>",
+ "id": "<src.operation.Operation object at 0x70f22d925a80>",
"name": "",
"shape": "point",
"xlabel": "emit: a",
@@ -59,13 +59,13 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a2ca230>",
- "B": "<src.operation.Operation object at 0x71ee1a496b90>",
+ "A": "<src.process.Process object at 0x70f22d9270a0>",
+ "B": "<src.operation.Operation object at 0x70f22d927e20>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a496b90>",
- "B": "<src.operation.Operation object at 0x71ee1a2cb730>",
+ "A": "<src.operation.Operation object at 0x70f22d927e20>",
+ "B": "<src.operation.Operation object at 0x70f22d925a80>",
"label": "a"
}
],
@@ -74,21 +74,21 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a287ac0>",
+ "id": "<src.process.Process object at 0x70f22db00b50>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a287040>",
+ "id": "<src.operation.Operation object at 0x70f22db00a30>",
"name": "",
"shape": "point",
"xlabel": "b",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a2ca380>",
+ "id": "<src.operation.Operation object at 0x70f22db02c80>",
"name": "",
"shape": "point",
"xlabel": "take: b",
@@ -97,13 +97,13 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a2ca380>",
- "B": "<src.operation.Operation object at 0x71ee1a287040>",
+ "A": "<src.operation.Operation object at 0x70f22db02c80>",
+ "B": "<src.operation.Operation object at 0x70f22db00a30>",
"label": "b"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a287040>",
- "B": "<src.process.Process object at 0x71ee1a287ac0>",
+ "A": "<src.operation.Operation object at 0x70f22db00a30>",
+ "B": "<src.process.Process object at 0x70f22db00b50>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf13/all_executors.json b/tests/ressources/workflows/wf13/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..a8a0a208e31df22bad878be85f71efbf6448f895
--- /dev/null
+++ b/tests/ressources/workflows/wf13/all_executors.json
@@ -0,0 +1,6 @@
+{
+ "<src.operation.Operation object at 0x70f22db029b0>": "b = sub1.out.a",
+ "Call_124185450906288": "sub1()",
+ "Call_124185450679648": "M2(b)",
+ "<src.operation.Operation object at 0x70f22e63fa90>": "a = M1()"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf13/all_processes.json b/tests/ressources/workflows/wf13/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..23dbe572fbf42db3218df7b072dd5675e2adaa5b
--- /dev/null
+++ b/tests/ressources/workflows/wf13/all_processes.json
@@ -0,0 +1,4 @@
+{
+ "<src.process.Process object at 0x70f22e610070>": "process M1 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db14370>": "process M2 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf13/all_subworkflows.json b/tests/ressources/workflows/wf13/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..cfa03bad80a3ef76e1160b33ebd5e8c6c45e2393
--- /dev/null
+++ b/tests/ressources/workflows/wf13/all_subworkflows.json
@@ -0,0 +1,3 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22dacb730>": "workflow sub1 {\n main:\n a = M1()\n\n emit:\n a\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf13/executors_per_subworkflows.json b/tests/ressources/workflows/wf13/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..a80c7ffd301bac215d307840ae111f3fd15874ae
--- /dev/null
+++ b/tests/ressources/workflows/wf13/executors_per_subworkflows.json
@@ -0,0 +1,5 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22dacb730>": {
+ "<src.operation.Operation object at 0x70f22e63fa90>": "a = M1()"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf13/specification_graph.json b/tests/ressources/workflows/wf13/specification_graph.json
index 9cfc7d41c9146129aea1f5b3b48883709c906294..b3f76bc74128df5ad39cb913de3c2529b577ad3d 100644
--- a/tests/ressources/workflows/wf13/specification_graph.json
+++ b/tests/ressources/workflows/wf13/specification_graph.json
@@ -1,21 +1,21 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a29d8d0>",
+ "id": "<src.operation.Operation object at 0x70f22db029b0>",
"name": "",
"shape": "point",
"xlabel": "b = sub1.out.a",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71eeceeed7b0>",
+ "id": "<src.process.Process object at 0x70f22db14370>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71eeceeec040>",
+ "id": "<src.operation.Operation object at 0x70f22db14160>",
"name": "",
"shape": "point",
"xlabel": "b",
@@ -24,18 +24,18 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71eeceeec2e0>",
- "B": "<src.operation.Operation object at 0x71ee1a29d8d0>",
+ "A": "<src.operation.Operation object at 0x70f22e6100d0>",
+ "B": "<src.operation.Operation object at 0x70f22db029b0>",
"label": "sub1.out.a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a29d8d0>",
- "B": "<src.operation.Operation object at 0x71eeceeec040>",
+ "A": "<src.operation.Operation object at 0x70f22db029b0>",
+ "B": "<src.operation.Operation object at 0x70f22db14160>",
"label": "b"
},
{
- "A": "<src.operation.Operation object at 0x71eeceeec040>",
- "B": "<src.process.Process object at 0x71eeceeed7b0>",
+ "A": "<src.operation.Operation object at 0x70f22db14160>",
+ "B": "<src.process.Process object at 0x70f22db14370>",
"label": ""
}
],
@@ -43,21 +43,21 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71eeceeed4b0>",
+ "id": "<src.operation.Operation object at 0x70f22e63fa90>",
"name": "",
"shape": "point",
"xlabel": "a = M1()",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71eeceeee830>",
+ "id": "<src.process.Process object at 0x70f22e610070>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71eeceeec2e0>",
+ "id": "<src.operation.Operation object at 0x70f22e6100d0>",
"name": "",
"shape": "point",
"xlabel": "emit: a",
@@ -66,13 +66,13 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71eeceeee830>",
- "B": "<src.operation.Operation object at 0x71eeceeed4b0>",
+ "A": "<src.process.Process object at 0x70f22e610070>",
+ "B": "<src.operation.Operation object at 0x70f22e63fa90>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71eeceeed4b0>",
- "B": "<src.operation.Operation object at 0x71eeceeec2e0>",
+ "A": "<src.operation.Operation object at 0x70f22e63fa90>",
+ "B": "<src.operation.Operation object at 0x70f22e6100d0>",
"label": "a"
}
],
diff --git a/tests/ressources/workflows/wf14/all_executors.json b/tests/ressources/workflows/wf14/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..3535e02189d29929e3bb1d197e8111e844187ddf
--- /dev/null
+++ b/tests/ressources/workflows/wf14/all_executors.json
@@ -0,0 +1,5 @@
+{
+ "<src.operation.Operation object at 0x70f22db13c10>": "b = Channel.empty()",
+ "Call_124185450986752": "sub2(b)",
+ "Call_124185450982384": "M2(b)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf14/all_processes.json b/tests/ressources/workflows/wf14/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..695fc41420d41de2f2ba54e17d871a1a5334a95a
--- /dev/null
+++ b/tests/ressources/workflows/wf14/all_processes.json
@@ -0,0 +1,3 @@
+{
+ "<src.process.Process object at 0x70f22db13c40>": "process M2 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf14/all_subworkflows.json b/tests/ressources/workflows/wf14/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..081f521ff8018e5ba9eea829ca6f61219a2f74f5
--- /dev/null
+++ b/tests/ressources/workflows/wf14/all_subworkflows.json
@@ -0,0 +1,3 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db123b0>": "workflow sub2 {\n\n take:\n b\n\n main:\n M2(b)\n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf14/executors_per_subworkflows.json b/tests/ressources/workflows/wf14/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..6a20ec784a334cf6d2f49f3fa640c3e288b82044
--- /dev/null
+++ b/tests/ressources/workflows/wf14/executors_per_subworkflows.json
@@ -0,0 +1,5 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db123b0>": {
+ "Call_124185450982384": "M2(b)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf14/specification_graph.json b/tests/ressources/workflows/wf14/specification_graph.json
index 02765cfdcf0ecb7b445ec2f5052d5f57abc532a0..c6ee9fd3b11f4580309daeb1d026863518a57e67 100644
--- a/tests/ressources/workflows/wf14/specification_graph.json
+++ b/tests/ressources/workflows/wf14/specification_graph.json
@@ -1,14 +1,14 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a498160>",
+ "id": "<src.operation.Operation object at 0x70f22db13c10>",
"name": "",
"shape": "point",
"xlabel": "b = Channel.empty()",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a3c9930>",
+ "id": "<src.operation.Operation object at 0x70f22db12ec0>",
"name": "",
"shape": "point",
"xlabel": "b",
@@ -17,13 +17,13 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a498160>",
- "B": "<src.operation.Operation object at 0x71ee1a3c9930>",
+ "A": "<src.operation.Operation object at 0x70f22db13c10>",
+ "B": "<src.operation.Operation object at 0x70f22db12ec0>",
"label": "b"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a3c9930>",
- "B": "<src.operation.Operation object at 0x71ee1a498250>",
+ "A": "<src.operation.Operation object at 0x70f22db12ec0>",
+ "B": "<src.operation.Operation object at 0x70f22db12740>",
"label": ""
}
],
@@ -31,21 +31,21 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a2686d0>",
+ "id": "<src.process.Process object at 0x70f22db13c40>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a269d20>",
+ "id": "<src.operation.Operation object at 0x70f22db138e0>",
"name": "",
"shape": "point",
"xlabel": "b",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a498250>",
+ "id": "<src.operation.Operation object at 0x70f22db12740>",
"name": "",
"shape": "point",
"xlabel": "take: b",
@@ -54,13 +54,13 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a498250>",
- "B": "<src.operation.Operation object at 0x71ee1a269d20>",
+ "A": "<src.operation.Operation object at 0x70f22db12740>",
+ "B": "<src.operation.Operation object at 0x70f22db138e0>",
"label": "b"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a269d20>",
- "B": "<src.process.Process object at 0x71ee1a2686d0>",
+ "A": "<src.operation.Operation object at 0x70f22db138e0>",
+ "B": "<src.process.Process object at 0x70f22db13c40>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf15/all_executors.json b/tests/ressources/workflows/wf15/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..71eba39590c1231cdcb1c03522fb86c87e6fbe6d
--- /dev/null
+++ b/tests/ressources/workflows/wf15/all_executors.json
@@ -0,0 +1,10 @@
+{
+ "Call_124185451046912": "sub2(sub_M3.out)",
+ "Call_124185451041632": "M1()",
+ "Call_124185451040144": "sub_M3(M1.out)",
+ "Call_124185451041056": "M2()",
+ "Call_124185451040528": "sub_M3(M2.out)",
+ "Call_124185451041968": "M4(b)",
+ "Call_124185451041344": "M3(ch)",
+ "Call_124185451039040": "M3(ch)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf15/all_processes.json b/tests/ressources/workflows/wf15/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..ca64096bda5545834d37ebaa4593c7afc53f8fea
--- /dev/null
+++ b/tests/ressources/workflows/wf15/all_processes.json
@@ -0,0 +1,7 @@
+{
+ "<src.process.Process object at 0x70f22db22680>": "process M4 {\n input:\n path a\n\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db21450>": "process M3 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db211e0>": "process M3 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db226b0>": "process M1 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db21000>": "process M2 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf15/all_subworkflows.json b/tests/ressources/workflows/wf15/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..3935b956dbc31c750ff51e60d3100eae6db8b1f9
--- /dev/null
+++ b/tests/ressources/workflows/wf15/all_subworkflows.json
@@ -0,0 +1,5 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db228c0>": "workflow sub2 {\n\n take:\n b\n\n main:\n M4(b)\n\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db20be0>": "workflow sub_M3 {\n\n take:\n ch\n\n main:\n M3(ch)\n\n emit:\n M3.out\n\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db20fd0>": "workflow sub_M3 {\n\n take:\n ch\n\n main:\n M3(ch)\n\n emit:\n M3.out\n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf15/executors_per_subworkflows.json b/tests/ressources/workflows/wf15/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..f1b189c0f9ee49bb7eaaa6880ecbd5525d1a387d
--- /dev/null
+++ b/tests/ressources/workflows/wf15/executors_per_subworkflows.json
@@ -0,0 +1,11 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db228c0>": {
+ "Call_124185451041968": "M4(b)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db20be0>": {
+ "Call_124185451041344": "M3(ch)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db20fd0>": {
+ "Call_124185451039040": "M3(ch)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf15/specification_graph.json b/tests/ressources/workflows/wf15/specification_graph.json
index 387e9473e7950d71a4bb607d69fa7ed636b46ab5..0e274bbd59d4cba3701e925d37d2cc0ebc33cfac 100644
--- a/tests/ressources/workflows/wf15/specification_graph.json
+++ b/tests/ressources/workflows/wf15/specification_graph.json
@@ -1,35 +1,35 @@
{
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a488a60>",
+ "id": "<src.process.Process object at 0x70f22db226b0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a5f90>",
+ "id": "<src.operation.Operation object at 0x70f22db20ee0>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a4a4820>",
+ "id": "<src.process.Process object at 0x70f22db21000>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a4d60>",
+ "id": "<src.operation.Operation object at 0x70f22db225c0>",
"name": "",
"shape": "point",
"xlabel": "M2.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a4c40>",
+ "id": "<src.operation.Operation object at 0x70f22db222c0>",
"name": "",
"shape": "point",
"xlabel": "sub_M3.out",
@@ -38,38 +38,38 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a488a60>",
- "B": "<src.operation.Operation object at 0x71ee1a4a5f90>",
+ "A": "<src.process.Process object at 0x70f22db226b0>",
+ "B": "<src.operation.Operation object at 0x70f22db20ee0>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a5f90>",
- "B": "<src.operation.Operation object at 0x71ee1a48fbe0>",
+ "A": "<src.operation.Operation object at 0x70f22db20ee0>",
+ "B": "<src.operation.Operation object at 0x70f22db20970>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a4a4820>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4d60>",
+ "A": "<src.process.Process object at 0x70f22db21000>",
+ "B": "<src.operation.Operation object at 0x70f22db225c0>",
"label": "M2.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a4d60>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4c70>",
+ "A": "<src.operation.Operation object at 0x70f22db225c0>",
+ "B": "<src.operation.Operation object at 0x70f22db21330>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a48fdc0>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4c40>",
+ "A": "<src.operation.Operation object at 0x70f22db20d30>",
+ "B": "<src.operation.Operation object at 0x70f22db222c0>",
"label": "sub_M3.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a4af0>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4c40>",
+ "A": "<src.operation.Operation object at 0x70f22db21b10>",
+ "B": "<src.operation.Operation object at 0x70f22db222c0>",
"label": "sub_M3.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a4c40>",
- "B": "<src.operation.Operation object at 0x71ee1a488b20>",
+ "A": "<src.operation.Operation object at 0x70f22db222c0>",
+ "B": "<src.operation.Operation object at 0x70f22db214e0>",
"label": ""
}
],
@@ -77,28 +77,28 @@
"sub_M3_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a4a5d20>",
+ "id": "<src.process.Process object at 0x70f22db21450>",
"name": "M3",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a5390>",
+ "id": "<src.operation.Operation object at 0x70f22db226e0>",
"name": "",
"shape": "point",
"xlabel": "ch",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48fbe0>",
+ "id": "<src.operation.Operation object at 0x70f22db20970>",
"name": "",
"shape": "point",
"xlabel": "take: ch",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48fdc0>",
+ "id": "<src.operation.Operation object at 0x70f22db20d30>",
"name": "",
"shape": "point",
"xlabel": "emit: M3.out",
@@ -107,18 +107,18 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a48fbe0>",
- "B": "<src.operation.Operation object at 0x71ee1a4a5390>",
+ "A": "<src.operation.Operation object at 0x70f22db20970>",
+ "B": "<src.operation.Operation object at 0x70f22db226e0>",
"label": "ch"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a5390>",
- "B": "<src.process.Process object at 0x71ee1a4a5d20>",
+ "A": "<src.operation.Operation object at 0x70f22db226e0>",
+ "B": "<src.process.Process object at 0x70f22db21450>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a4a5d20>",
- "B": "<src.operation.Operation object at 0x71ee1a48fdc0>",
+ "A": "<src.process.Process object at 0x70f22db21450>",
+ "B": "<src.operation.Operation object at 0x70f22db20d30>",
"label": "M3.out"
}
],
@@ -127,28 +127,28 @@
"sub_M3_1": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a4a4a60>",
+ "id": "<src.process.Process object at 0x70f22db211e0>",
"name": "M3",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a4880>",
+ "id": "<src.operation.Operation object at 0x70f22db209d0>",
"name": "",
"shape": "point",
"xlabel": "ch",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a4c70>",
+ "id": "<src.operation.Operation object at 0x70f22db21330>",
"name": "",
"shape": "point",
"xlabel": "take: ch",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a4af0>",
+ "id": "<src.operation.Operation object at 0x70f22db21b10>",
"name": "",
"shape": "point",
"xlabel": "emit: M3.out",
@@ -157,18 +157,18 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a4a4c70>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4880>",
+ "A": "<src.operation.Operation object at 0x70f22db21330>",
+ "B": "<src.operation.Operation object at 0x70f22db209d0>",
"label": "ch"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a4880>",
- "B": "<src.process.Process object at 0x71ee1a4a4a60>",
+ "A": "<src.operation.Operation object at 0x70f22db209d0>",
+ "B": "<src.process.Process object at 0x70f22db211e0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a4a4a60>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4af0>",
+ "A": "<src.process.Process object at 0x70f22db211e0>",
+ "B": "<src.operation.Operation object at 0x70f22db21b10>",
"label": "M3.out"
}
],
@@ -177,21 +177,21 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a48a890>",
+ "id": "<src.process.Process object at 0x70f22db22680>",
"name": "M4",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48a470>",
+ "id": "<src.operation.Operation object at 0x70f22db227d0>",
"name": "",
"shape": "point",
"xlabel": "b",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a488b20>",
+ "id": "<src.operation.Operation object at 0x70f22db214e0>",
"name": "",
"shape": "point",
"xlabel": "take: b",
@@ -200,13 +200,13 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a488b20>",
- "B": "<src.operation.Operation object at 0x71ee1a48a470>",
+ "A": "<src.operation.Operation object at 0x70f22db214e0>",
+ "B": "<src.operation.Operation object at 0x70f22db227d0>",
"label": "b"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a48a470>",
- "B": "<src.process.Process object at 0x71ee1a48a890>",
+ "A": "<src.operation.Operation object at 0x70f22db227d0>",
+ "B": "<src.process.Process object at 0x70f22db22680>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf16/all_executors.json b/tests/ressources/workflows/wf16/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..a9986f3359cdb1c62dcf21dcdea28c488001cd44
--- /dev/null
+++ b/tests/ressources/workflows/wf16/all_executors.json
@@ -0,0 +1,8 @@
+{
+ "Call_124185451044368": "sub2(M3.out)",
+ "Call_124185451048160": "M1()",
+ "Call_124185451044800": "M3(M1.out)",
+ "Call_124185451050272": "M2()",
+ "Call_124185451051136": "M3(M2.out)",
+ "Call_124185451043792": "M4(b)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf16/all_processes.json b/tests/ressources/workflows/wf16/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..9972dc8d402ce4162af8a2158ee3a8e6dd13749d
--- /dev/null
+++ b/tests/ressources/workflows/wf16/all_processes.json
@@ -0,0 +1,7 @@
+{
+ "<src.process.Process object at 0x70f22db22050>": "process M4 {\n input:\n path a\n\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db22e90>": "process M1 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db22ef0>": "process M3 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db23370>": "process M2 {\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db232e0>": "process M3 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf16/all_subworkflows.json b/tests/ressources/workflows/wf16/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..679d70c6f1dc0c4d0e49188699ec0d9b29e0e94d
--- /dev/null
+++ b/tests/ressources/workflows/wf16/all_subworkflows.json
@@ -0,0 +1,3 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db21f30>": "workflow sub2 {\n\n take:\n b\n\n main:\n M4(b)\n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf16/executors_per_subworkflows.json b/tests/ressources/workflows/wf16/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..730af7d71ce5bb5bff3a5194dd39335984dc4e0c
--- /dev/null
+++ b/tests/ressources/workflows/wf16/executors_per_subworkflows.json
@@ -0,0 +1,5 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db21f30>": {
+ "Call_124185451043792": "M4(b)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf16/specification_graph.json b/tests/ressources/workflows/wf16/specification_graph.json
index 528f2bb2d8d9913996e1c0e21475bcb0065d0bda..480d6f5363269463ff7604a142068ddb7886d8f1 100644
--- a/tests/ressources/workflows/wf16/specification_graph.json
+++ b/tests/ressources/workflows/wf16/specification_graph.json
@@ -1,49 +1,49 @@
{
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a53a5c0>",
+ "id": "<src.process.Process object at 0x70f22db22e90>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a2562f0>",
+ "id": "<src.process.Process object at 0x70f22db22ef0>",
"name": "M3",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a257df0>",
+ "id": "<src.operation.Operation object at 0x70f22db23400>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a2dde70>",
+ "id": "<src.process.Process object at 0x70f22db23370>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a4a6380>",
+ "id": "<src.process.Process object at 0x70f22db232e0>",
"name": "M3",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a63e0>",
+ "id": "<src.operation.Operation object at 0x70f22db236d0>",
"name": "",
"shape": "point",
"xlabel": "M2.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a48e0>",
+ "id": "<src.operation.Operation object at 0x70f22db23e50>",
"name": "",
"shape": "point",
"xlabel": "M3.out",
@@ -52,38 +52,38 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a53a5c0>",
- "B": "<src.operation.Operation object at 0x71ee1a257df0>",
+ "A": "<src.process.Process object at 0x70f22db22e90>",
+ "B": "<src.operation.Operation object at 0x70f22db23400>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a257df0>",
- "B": "<src.process.Process object at 0x71ee1a2562f0>",
+ "A": "<src.operation.Operation object at 0x70f22db23400>",
+ "B": "<src.process.Process object at 0x70f22db22ef0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a2dde70>",
- "B": "<src.operation.Operation object at 0x71ee1a4a63e0>",
+ "A": "<src.process.Process object at 0x70f22db23370>",
+ "B": "<src.operation.Operation object at 0x70f22db236d0>",
"label": "M2.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a63e0>",
- "B": "<src.process.Process object at 0x71ee1a4a6380>",
+ "A": "<src.operation.Operation object at 0x70f22db236d0>",
+ "B": "<src.process.Process object at 0x70f22db232e0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a2562f0>",
- "B": "<src.operation.Operation object at 0x71ee1a4a48e0>",
+ "A": "<src.process.Process object at 0x70f22db22ef0>",
+ "B": "<src.operation.Operation object at 0x70f22db23e50>",
"label": "M3.out"
},
{
- "A": "<src.process.Process object at 0x71ee1a4a6380>",
- "B": "<src.operation.Operation object at 0x71ee1a4a48e0>",
+ "A": "<src.process.Process object at 0x70f22db232e0>",
+ "B": "<src.operation.Operation object at 0x70f22db23e50>",
"label": "M3.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a48e0>",
- "B": "<src.operation.Operation object at 0x71ee1a53b220>",
+ "A": "<src.operation.Operation object at 0x70f22db23e50>",
+ "B": "<src.operation.Operation object at 0x70f22db21cf0>",
"label": ""
}
],
@@ -91,21 +91,21 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a53aa10>",
+ "id": "<src.process.Process object at 0x70f22db22050>",
"name": "M4",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a53b2b0>",
+ "id": "<src.operation.Operation object at 0x70f22db238b0>",
"name": "",
"shape": "point",
"xlabel": "b",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a53b220>",
+ "id": "<src.operation.Operation object at 0x70f22db21cf0>",
"name": "",
"shape": "point",
"xlabel": "take: b",
@@ -114,13 +114,13 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a53b220>",
- "B": "<src.operation.Operation object at 0x71ee1a53b2b0>",
+ "A": "<src.operation.Operation object at 0x70f22db21cf0>",
+ "B": "<src.operation.Operation object at 0x70f22db238b0>",
"label": "b"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a53b2b0>",
- "B": "<src.process.Process object at 0x71ee1a53aa10>",
+ "A": "<src.operation.Operation object at 0x70f22db238b0>",
+ "B": "<src.process.Process object at 0x70f22db22050>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf17/all_executors.json b/tests/ressources/workflows/wf17/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..b70f813b76c48f57de2972e6a9bcf29c20da5d4a
--- /dev/null
+++ b/tests/ressources/workflows/wf17/all_executors.json
@@ -0,0 +1,16 @@
+{
+ "<src.operation.Operation object at 0x70f22db20eb0>": "c = a",
+ "<src.operation.Operation object at 0x70f22db21060>": "a = sub1()",
+ "<src.operation.Operation object at 0x70f22db21330>": "a = sub2()",
+ "<src.operation.Operation object at 0x70f22db23ac0>": "ch = Channel.empty()",
+ "Call_124185451045376": "M1()",
+ "<src.operation.Operation object at 0x70f22db20be0>": "a = M2.out",
+ "Call_124185451048016": "M2(M1.out)",
+ "<src.operation.Operation object at 0x70f22db22fb0>": "a = Channel.empty()",
+ "Call_124185451040720": "M1()",
+ "Call_124185451040672": "sub3()",
+ "Call_124185451040240": "M3()",
+ "<src.operation.Operation object at 0x70f22db20af0>": "a = M2.out",
+ "Call_124185451045568": "M2(M1.out)",
+ "<src.operation.Operation object at 0x70f22db217b0>": "a = Channel.empty()"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf17/all_processes.json b/tests/ressources/workflows/wf17/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..1a5168a03c65bb258521a56b5020aef5eadd08fc
--- /dev/null
+++ b/tests/ressources/workflows/wf17/all_processes.json
@@ -0,0 +1,7 @@
+{
+ "<src.process.Process object at 0x70f22db22950>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db23670>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db20a30>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db215a0>": "process M3 {\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db21180>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf17/all_subworkflows.json b/tests/ressources/workflows/wf17/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..aa03b73d5d78e1a5ee6e920f1116ba1471667a9f
--- /dev/null
+++ b/tests/ressources/workflows/wf17/all_subworkflows.json
@@ -0,0 +1,5 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db22650>": "workflow sub3 {\n main:\n ch = Channel.empty()\n \n\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db20f10>": "workflow sub1 {\n main:\n M1()\n if(2==2){\n M2(M1.out)\n a = M2.out\n } else {\n a = Channel.empty()\n }\n\n emit:\n a\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db22980>": "workflow sub2 {\n main:\n M1()\n if(2==2){\n M2(M1.out)\n a = M2.out\n } else {\n a = Channel.empty()\n }\n sub3()\n M3()\n\n emit:\n a\n \n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf17/executors_per_subworkflows.json b/tests/ressources/workflows/wf17/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..a00d97d59125ec5761299ba4c1f4347ca72d68df
--- /dev/null
+++ b/tests/ressources/workflows/wf17/executors_per_subworkflows.json
@@ -0,0 +1,20 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db22650>": {
+ "<src.operation.Operation object at 0x70f22db23ac0>": "ch = Channel.empty()"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db20f10>": {
+ "Call_124185451045376": "M1()",
+ "<src.operation.Operation object at 0x70f22db20be0>": "a = M2.out",
+ "Call_124185451048016": "M2(M1.out)",
+ "<src.operation.Operation object at 0x70f22db22fb0>": "a = Channel.empty()"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db22980>": {
+ "Call_124185451040720": "M1()",
+ "Call_124185451040672": "sub3()",
+ "Call_124185451040240": "M3()",
+ "<src.operation.Operation object at 0x70f22db20af0>": "a = M2.out",
+ "Call_124185451045568": "M2(M1.out)",
+ "<src.operation.Operation object at 0x70f22db217b0>": "a = Channel.empty()",
+ "<src.operation.Operation object at 0x70f22db23ac0>": "ch = Channel.empty()"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf17/specification_graph.json b/tests/ressources/workflows/wf17/specification_graph.json
index b67a38d69e5fbdbd3d0fef08750cc4f0a82b756f..08430315108fca2118357fffd241569c4a3f552c 100644
--- a/tests/ressources/workflows/wf17/specification_graph.json
+++ b/tests/ressources/workflows/wf17/specification_graph.json
@@ -1,21 +1,21 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a497850>",
+ "id": "<src.operation.Operation object at 0x70f22db21060>",
"name": "",
"shape": "point",
"xlabel": "a = sub1()",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a7070>",
+ "id": "<src.operation.Operation object at 0x70f22db21330>",
"name": "",
"shape": "point",
"xlabel": "a = sub2()",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a497310>",
+ "id": "<src.operation.Operation object at 0x70f22db20eb0>",
"name": "",
"shape": "point",
"xlabel": "c = a",
@@ -24,23 +24,23 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a4a7190>",
- "B": "<src.operation.Operation object at 0x71ee1a497850>",
+ "A": "<src.operation.Operation object at 0x70f22db23ca0>",
+ "B": "<src.operation.Operation object at 0x70f22db21060>",
"label": "emit: a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a6920>",
- "B": "<src.operation.Operation object at 0x71ee1a4a7070>",
+ "A": "<src.operation.Operation object at 0x70f22db21300>",
+ "B": "<src.operation.Operation object at 0x70f22db21330>",
"label": "emit: a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a497850>",
- "B": "<src.operation.Operation object at 0x71ee1a497310>",
+ "A": "<src.operation.Operation object at 0x70f22db21060>",
+ "B": "<src.operation.Operation object at 0x70f22db20eb0>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a7070>",
- "B": "<src.operation.Operation object at 0x71ee1a497310>",
+ "A": "<src.operation.Operation object at 0x70f22db21330>",
+ "B": "<src.operation.Operation object at 0x70f22db20eb0>",
"label": "a"
}
],
@@ -48,42 +48,42 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a2cb3a0>",
+ "id": "<src.operation.Operation object at 0x70f22db20be0>",
"name": "",
"shape": "point",
"xlabel": "a = M2.out",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a240fa0>",
+ "id": "<src.process.Process object at 0x70f22db23670>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a243850>",
+ "id": "<src.operation.Operation object at 0x70f22db224d0>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a7400>",
+ "id": "<src.operation.Operation object at 0x70f22db22fb0>",
"name": "",
"shape": "point",
"xlabel": "a = Channel.empty()",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a2cbbb0>",
+ "id": "<src.process.Process object at 0x70f22db22950>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a7190>",
+ "id": "<src.operation.Operation object at 0x70f22db23ca0>",
"name": "",
"shape": "point",
"xlabel": "emit: a",
@@ -92,28 +92,28 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a240fa0>",
- "B": "<src.operation.Operation object at 0x71ee1a2cb3a0>",
+ "A": "<src.process.Process object at 0x70f22db23670>",
+ "B": "<src.operation.Operation object at 0x70f22db20be0>",
"label": "M2.out"
},
{
- "A": "<src.process.Process object at 0x71ee1a2cbbb0>",
- "B": "<src.operation.Operation object at 0x71ee1a243850>",
+ "A": "<src.process.Process object at 0x70f22db22950>",
+ "B": "<src.operation.Operation object at 0x70f22db224d0>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a243850>",
- "B": "<src.process.Process object at 0x71ee1a240fa0>",
+ "A": "<src.operation.Operation object at 0x70f22db224d0>",
+ "B": "<src.process.Process object at 0x70f22db23670>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a2cb3a0>",
- "B": "<src.operation.Operation object at 0x71ee1a4a7190>",
+ "A": "<src.operation.Operation object at 0x70f22db20be0>",
+ "B": "<src.operation.Operation object at 0x70f22db23ca0>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a7400>",
- "B": "<src.operation.Operation object at 0x71ee1a4a7190>",
+ "A": "<src.operation.Operation object at 0x70f22db22fb0>",
+ "B": "<src.operation.Operation object at 0x70f22db23ca0>",
"label": "a"
}
],
@@ -122,49 +122,49 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a4a6950>",
+ "id": "<src.operation.Operation object at 0x70f22db20af0>",
"name": "",
"shape": "point",
"xlabel": "a = M2.out",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a4a6650>",
+ "id": "<src.process.Process object at 0x70f22db21180>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a67d0>",
+ "id": "<src.operation.Operation object at 0x70f22db20f70>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a68c0>",
+ "id": "<src.operation.Operation object at 0x70f22db217b0>",
"name": "",
"shape": "point",
"xlabel": "a = Channel.empty()",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a4a6c50>",
+ "id": "<src.process.Process object at 0x70f22db20a30>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a4a69b0>",
+ "id": "<src.process.Process object at 0x70f22db215a0>",
"name": "M3",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a6920>",
+ "id": "<src.operation.Operation object at 0x70f22db21300>",
"name": "",
"shape": "point",
"xlabel": "emit: a",
@@ -173,28 +173,28 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a4a6650>",
- "B": "<src.operation.Operation object at 0x71ee1a4a6950>",
+ "A": "<src.process.Process object at 0x70f22db21180>",
+ "B": "<src.operation.Operation object at 0x70f22db20af0>",
"label": "M2.out"
},
{
- "A": "<src.process.Process object at 0x71ee1a4a6c50>",
- "B": "<src.operation.Operation object at 0x71ee1a4a67d0>",
+ "A": "<src.process.Process object at 0x70f22db20a30>",
+ "B": "<src.operation.Operation object at 0x70f22db20f70>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a67d0>",
- "B": "<src.process.Process object at 0x71ee1a4a6650>",
+ "A": "<src.operation.Operation object at 0x70f22db20f70>",
+ "B": "<src.process.Process object at 0x70f22db21180>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a6950>",
- "B": "<src.operation.Operation object at 0x71ee1a4a6920>",
+ "A": "<src.operation.Operation object at 0x70f22db20af0>",
+ "B": "<src.operation.Operation object at 0x70f22db21300>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4a68c0>",
- "B": "<src.operation.Operation object at 0x71ee1a4a6920>",
+ "A": "<src.operation.Operation object at 0x70f22db217b0>",
+ "B": "<src.operation.Operation object at 0x70f22db21300>",
"label": "a"
}
],
@@ -202,7 +202,7 @@
"sub3_0": {
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a4a6cb0>",
+ "id": "<src.operation.Operation object at 0x70f22db23ac0>",
"name": "",
"shape": "point",
"xlabel": "ch = Channel.empty()",
diff --git a/tests/ressources/workflows/wf18/all_executors.json b/tests/ressources/workflows/wf18/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..4717a59dff20306ceaa1c3af1e63d00f9f11b3f5
--- /dev/null
+++ b/tests/ressources/workflows/wf18/all_executors.json
@@ -0,0 +1,11 @@
+{
+ "<src.operation.Operation object at 0x70f22db104f0>": "a = sub1.out",
+ "Call_124185450980512": "sub1()",
+ "Call_124185450976240": "sub2()",
+ "<src.operation.Operation object at 0x70f22db12980>": "b = sub2.out",
+ "<src.operation.Operation object at 0x70f22d90d300>": "b = Channel.empty()",
+ "Call_124185450983152": "M1()",
+ "Call_124185450981376": "M2(M1.out)",
+ "Call_124185450987232": "M1()",
+ "Call_124185450980224": "M2(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf18/all_processes.json b/tests/ressources/workflows/wf18/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..35f4925acec7b2c02f4adfbc299962b39d203fe9
--- /dev/null
+++ b/tests/ressources/workflows/wf18/all_processes.json
@@ -0,0 +1,6 @@
+{
+ "<src.process.Process object at 0x70f22db12f80>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db12650>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db11f30>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db13460>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf18/all_subworkflows.json b/tests/ressources/workflows/wf18/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..dec2746d3fecbc202f74c35bd3adc043fbbe04fc
--- /dev/null
+++ b/tests/ressources/workflows/wf18/all_subworkflows.json
@@ -0,0 +1,4 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db13580>": "workflow sub1 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M2.out\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db12d40>": "workflow sub2 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M2.out\n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf18/executors_per_subworkflows.json b/tests/ressources/workflows/wf18/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..b4dd3fb8e23133d5404377192b9ddbbfde33f16a
--- /dev/null
+++ b/tests/ressources/workflows/wf18/executors_per_subworkflows.json
@@ -0,0 +1,10 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db13580>": {
+ "Call_124185450983152": "M1()",
+ "Call_124185450981376": "M2(M1.out)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db12d40>": {
+ "Call_124185450987232": "M1()",
+ "Call_124185450980224": "M2(M1.out)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf18/specification_graph.json b/tests/ressources/workflows/wf18/specification_graph.json
index 7fe9450dccde6c46ff2699a4da0f3c5323eb4a9c..94ff4940a0893c74279aadcca5b5a96992dd6553 100644
--- a/tests/ressources/workflows/wf18/specification_graph.json
+++ b/tests/ressources/workflows/wf18/specification_graph.json
@@ -1,21 +1,21 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x79717dcc3a00>",
+ "id": "<src.operation.Operation object at 0x70f22db104f0>",
"name": "",
"shape": "point",
"xlabel": "a = sub1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x79717db0d3c0>",
+ "id": "<src.operation.Operation object at 0x70f22db12980>",
"name": "",
"shape": "point",
"xlabel": "b = sub2.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x79717db0e2f0>",
+ "id": "<src.operation.Operation object at 0x70f22d90d300>",
"name": "",
"shape": "point",
"xlabel": "b = Channel.empty()",
@@ -24,13 +24,13 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x79717db0d900>",
- "B": "<src.operation.Operation object at 0x79717dcc3a00>",
+ "A": "<src.operation.Operation object at 0x70f22db141f0>",
+ "B": "<src.operation.Operation object at 0x70f22db104f0>",
"label": "sub1.out"
},
{
- "A": "<src.operation.Operation object at 0x79717db0dc30>",
- "B": "<src.operation.Operation object at 0x79717db0d3c0>",
+ "A": "<src.operation.Operation object at 0x70f2e278b040>",
+ "B": "<src.operation.Operation object at 0x70f22db12980>",
"label": "sub2.out"
}
],
@@ -38,28 +38,28 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x79717db0d0c0>",
+ "id": "<src.process.Process object at 0x70f22db12f80>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x79717db0d180>",
+ "id": "<src.process.Process object at 0x70f22db12650>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x79717db0cdc0>",
+ "id": "<src.operation.Operation object at 0x70f22d925a80>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x79717db0d900>",
+ "id": "<src.operation.Operation object at 0x70f22db141f0>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -68,18 +68,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x79717db0d0c0>",
- "B": "<src.operation.Operation object at 0x79717db0cdc0>",
+ "A": "<src.process.Process object at 0x70f22db12f80>",
+ "B": "<src.operation.Operation object at 0x70f22d925a80>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x79717db0cdc0>",
- "B": "<src.process.Process object at 0x79717db0d180>",
+ "A": "<src.operation.Operation object at 0x70f22d925a80>",
+ "B": "<src.process.Process object at 0x70f22db12650>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x79717db0d180>",
- "B": "<src.operation.Operation object at 0x79717db0d900>",
+ "A": "<src.process.Process object at 0x70f22db12650>",
+ "B": "<src.operation.Operation object at 0x70f22db141f0>",
"label": "M2.out"
}
],
@@ -88,28 +88,28 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x79717db0dfc0>",
+ "id": "<src.process.Process object at 0x70f22db11f30>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x79717db0e110>",
+ "id": "<src.process.Process object at 0x70f22db13460>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x79717db0e200>",
+ "id": "<src.operation.Operation object at 0x70f2e278b8e0>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x79717db0dc30>",
+ "id": "<src.operation.Operation object at 0x70f2e278b040>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -118,18 +118,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x79717db0dfc0>",
- "B": "<src.operation.Operation object at 0x79717db0e200>",
+ "A": "<src.process.Process object at 0x70f22db11f30>",
+ "B": "<src.operation.Operation object at 0x70f2e278b8e0>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x79717db0e200>",
- "B": "<src.process.Process object at 0x79717db0e110>",
+ "A": "<src.operation.Operation object at 0x70f2e278b8e0>",
+ "B": "<src.process.Process object at 0x70f22db13460>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x79717db0e110>",
- "B": "<src.operation.Operation object at 0x79717db0dc30>",
+ "A": "<src.process.Process object at 0x70f22db13460>",
+ "B": "<src.operation.Operation object at 0x70f2e278b040>",
"label": "M2.out"
}
],
diff --git a/tests/ressources/workflows/wf2/all_executors.json b/tests/ressources/workflows/wf2/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..746c99325d51f8cf0d051363d2583a1ca8c6ac5f
--- /dev/null
+++ b/tests/ressources/workflows/wf2/all_executors.json
@@ -0,0 +1,8 @@
+{
+ "Call_124185451102800": "sub1()",
+ "Call_124185450907824": "sub2()",
+ "Call_124185450917136": "M1()",
+ "Call_124185450918240": "M2(M1.out)",
+ "Call_124185449161264": "M1()",
+ "Call_124185450877456": "M2(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf2/all_processes.json b/tests/ressources/workflows/wf2/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..aa89886cfc1177e4399429826dfe823ddf95f23a
--- /dev/null
+++ b/tests/ressources/workflows/wf2/all_processes.json
@@ -0,0 +1,6 @@
+{
+ "<src.process.Process object at 0x70f22db00430>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db00400>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22dafaa40>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22daf9f60>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf2/all_subworkflows.json b/tests/ressources/workflows/wf2/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..b8538588c096e1683d512fed2b6e26c3c0295791
--- /dev/null
+++ b/tests/ressources/workflows/wf2/all_subworkflows.json
@@ -0,0 +1,4 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db02c80>": "workflow sub1 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M2.out\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db024a0>": "workflow sub2 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M2.out\n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf2/executors_per_subworkflows.json b/tests/ressources/workflows/wf2/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..8053ac8cafb427bcb68a8de72ed5af0eaccfb553
--- /dev/null
+++ b/tests/ressources/workflows/wf2/executors_per_subworkflows.json
@@ -0,0 +1,10 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db02c80>": {
+ "Call_124185450917136": "M1()",
+ "Call_124185450918240": "M2(M1.out)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db024a0>": {
+ "Call_124185449161264": "M1()",
+ "Call_124185450877456": "M2(M1.out)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf2/specification_graph.json b/tests/ressources/workflows/wf2/specification_graph.json
index dac46c982ea5c6f39f1f7675cc772479f631edeb..3ccb1bf8e34ea8765fb9f98df38130aeff772cb6 100644
--- a/tests/ressources/workflows/wf2/specification_graph.json
+++ b/tests/ressources/workflows/wf2/specification_graph.json
@@ -5,28 +5,28 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a284100>",
+ "id": "<src.process.Process object at 0x70f22db00430>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a285c30>",
+ "id": "<src.process.Process object at 0x70f22db00400>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a2b3f10>",
+ "id": "<src.operation.Operation object at 0x70f22db00a30>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a229480>",
+ "id": "<src.operation.Operation object at 0x70f22da2b1f0>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -35,18 +35,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a284100>",
- "B": "<src.operation.Operation object at 0x71ee1a2b3f10>",
+ "A": "<src.process.Process object at 0x70f22db00430>",
+ "B": "<src.operation.Operation object at 0x70f22db00a30>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a2b3f10>",
- "B": "<src.process.Process object at 0x71ee1a285c30>",
+ "A": "<src.operation.Operation object at 0x70f22db00a30>",
+ "B": "<src.process.Process object at 0x70f22db00400>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a285c30>",
- "B": "<src.operation.Operation object at 0x71ee1a229480>",
+ "A": "<src.process.Process object at 0x70f22db00400>",
+ "B": "<src.operation.Operation object at 0x70f22da2b1f0>",
"label": "M2.out"
}
],
@@ -55,28 +55,28 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a4887c0>",
+ "id": "<src.process.Process object at 0x70f22dafaa40>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a48ada0>",
+ "id": "<src.process.Process object at 0x70f22daf9f60>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48a5f0>",
+ "id": "<src.operation.Operation object at 0x70f22dafb550>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48ad40>",
+ "id": "<src.operation.Operation object at 0x70f22db02680>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -85,18 +85,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a4887c0>",
- "B": "<src.operation.Operation object at 0x71ee1a48a5f0>",
+ "A": "<src.process.Process object at 0x70f22dafaa40>",
+ "B": "<src.operation.Operation object at 0x70f22dafb550>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a48a5f0>",
- "B": "<src.process.Process object at 0x71ee1a48ada0>",
+ "A": "<src.operation.Operation object at 0x70f22dafb550>",
+ "B": "<src.process.Process object at 0x70f22daf9f60>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a48ada0>",
- "B": "<src.operation.Operation object at 0x71ee1a48ad40>",
+ "A": "<src.process.Process object at 0x70f22daf9f60>",
+ "B": "<src.operation.Operation object at 0x70f22db02680>",
"label": "M2.out"
}
],
diff --git a/tests/ressources/workflows/wf3/all_executors.json b/tests/ressources/workflows/wf3/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..07bd31d7679a08b149ede93445d1a3f4b3c058f7
--- /dev/null
+++ b/tests/ressources/workflows/wf3/all_executors.json
@@ -0,0 +1,9 @@
+{
+ "<src.operation.Operation object at 0x70f22e613c40>": "c = a",
+ "<src.operation.Operation object at 0x70f22da2a9e0>": "a = sub1()",
+ "<src.operation.Operation object at 0x70f22db12f80>": "a = sub2()",
+ "Call_124185450982720": "M1()",
+ "Call_124185450982672": "M2(M1.out)",
+ "Call_124185450981376": "M1()",
+ "Call_124185450981232": "M2(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf3/all_processes.json b/tests/ressources/workflows/wf3/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..80ffb7b61072c028fff98ba376557130f5dbd3ab
--- /dev/null
+++ b/tests/ressources/workflows/wf3/all_processes.json
@@ -0,0 +1,6 @@
+{
+ "<src.process.Process object at 0x70f22db12cb0>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db12da0>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db12740>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db125f0>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf3/all_subworkflows.json b/tests/ressources/workflows/wf3/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..8654c9ef4648cd64cabdcdc1977a30d7dc37b40e
--- /dev/null
+++ b/tests/ressources/workflows/wf3/all_subworkflows.json
@@ -0,0 +1,4 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db12260>": "workflow sub1 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M2.out\n}",
+ "<src.subworkflow.Subworkflow object at 0x70f22db12380>": "workflow sub2 {\n main:\n M1()\n M2(M1.out)\n\n emit:\n M2.out\n\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf3/executors_per_subworkflows.json b/tests/ressources/workflows/wf3/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..45a27464946c661e038ad0af7bec56fffb4ce259
--- /dev/null
+++ b/tests/ressources/workflows/wf3/executors_per_subworkflows.json
@@ -0,0 +1,10 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db12260>": {
+ "Call_124185450982720": "M1()",
+ "Call_124185450982672": "M2(M1.out)"
+ },
+ "<src.subworkflow.Subworkflow object at 0x70f22db12380>": {
+ "Call_124185450981376": "M1()",
+ "Call_124185450981232": "M2(M1.out)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf3/specification_graph.json b/tests/ressources/workflows/wf3/specification_graph.json
index e5f689e9be48980e7bb97496ec4afb1821d5956e..799e222726082740a291150bd03756a38726cbbc 100644
--- a/tests/ressources/workflows/wf3/specification_graph.json
+++ b/tests/ressources/workflows/wf3/specification_graph.json
@@ -1,21 +1,21 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a4971c0>",
+ "id": "<src.operation.Operation object at 0x70f22da2a9e0>",
"name": "",
"shape": "point",
"xlabel": "a = sub1()",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a48ada0>",
+ "id": "<src.operation.Operation object at 0x70f22db12f80>",
"name": "",
"shape": "point",
"xlabel": "a = sub2()",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496da0>",
+ "id": "<src.operation.Operation object at 0x70f22e613c40>",
"name": "",
"shape": "point",
"xlabel": "c = a",
@@ -24,23 +24,23 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a340fa0>",
- "B": "<src.operation.Operation object at 0x71ee1a4971c0>",
+ "A": "<src.operation.Operation object at 0x70f22d90e470>",
+ "B": "<src.operation.Operation object at 0x70f22da2a9e0>",
"label": "emit: M2.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a32d7e0>",
- "B": "<src.operation.Operation object at 0x71ee1a48ada0>",
+ "A": "<src.operation.Operation object at 0x70f22db123b0>",
+ "B": "<src.operation.Operation object at 0x70f22db12f80>",
"label": "emit: M2.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4971c0>",
- "B": "<src.operation.Operation object at 0x71ee1a496da0>",
+ "A": "<src.operation.Operation object at 0x70f22da2a9e0>",
+ "B": "<src.operation.Operation object at 0x70f22e613c40>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a48ada0>",
- "B": "<src.operation.Operation object at 0x71ee1a496da0>",
+ "A": "<src.operation.Operation object at 0x70f22db12f80>",
+ "B": "<src.operation.Operation object at 0x70f22e613c40>",
"label": "a"
}
],
@@ -48,28 +48,28 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a496c20>",
+ "id": "<src.process.Process object at 0x70f22db12cb0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a496830>",
+ "id": "<src.process.Process object at 0x70f22db12da0>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4967d0>",
+ "id": "<src.operation.Operation object at 0x70f22db12e00>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a340fa0>",
+ "id": "<src.operation.Operation object at 0x70f22d90e470>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -78,18 +78,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a496c20>",
- "B": "<src.operation.Operation object at 0x71ee1a4967d0>",
+ "A": "<src.process.Process object at 0x70f22db12cb0>",
+ "B": "<src.operation.Operation object at 0x70f22db12e00>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4967d0>",
- "B": "<src.process.Process object at 0x71ee1a496830>",
+ "A": "<src.operation.Operation object at 0x70f22db12e00>",
+ "B": "<src.process.Process object at 0x70f22db12da0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a496830>",
- "B": "<src.operation.Operation object at 0x71ee1a340fa0>",
+ "A": "<src.process.Process object at 0x70f22db12da0>",
+ "B": "<src.operation.Operation object at 0x70f22d90e470>",
"label": "M2.out"
}
],
@@ -98,28 +98,28 @@
"sub2_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a488a60>",
+ "id": "<src.process.Process object at 0x70f22db12740>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a240760>",
+ "id": "<src.process.Process object at 0x70f22db125f0>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a32da50>",
+ "id": "<src.operation.Operation object at 0x70f22db12530>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a32d7e0>",
+ "id": "<src.operation.Operation object at 0x70f22db123b0>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -128,18 +128,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a488a60>",
- "B": "<src.operation.Operation object at 0x71ee1a32da50>",
+ "A": "<src.process.Process object at 0x70f22db12740>",
+ "B": "<src.operation.Operation object at 0x70f22db12530>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a32da50>",
- "B": "<src.process.Process object at 0x71ee1a240760>",
+ "A": "<src.operation.Operation object at 0x70f22db12530>",
+ "B": "<src.process.Process object at 0x70f22db125f0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a240760>",
- "B": "<src.operation.Operation object at 0x71ee1a32d7e0>",
+ "A": "<src.process.Process object at 0x70f22db125f0>",
+ "B": "<src.operation.Operation object at 0x70f22db123b0>",
"label": "M2.out"
}
],
diff --git a/tests/ressources/workflows/wf4/all_executors.json b/tests/ressources/workflows/wf4/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..4d0c3686abeb04c0426880425b517fa86e4260bf
--- /dev/null
+++ b/tests/ressources/workflows/wf4/all_executors.json
@@ -0,0 +1,5 @@
+{
+ "Call_124185450972880": "sub1(Channel.empty())",
+ "Call_124185450986560": "M1(a)",
+ "Call_124185450981760": "M2(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf4/all_processes.json b/tests/ressources/workflows/wf4/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..1385e6bc02728ebd3d0ce7e47a7cca6376dea412
--- /dev/null
+++ b/tests/ressources/workflows/wf4/all_processes.json
@@ -0,0 +1,4 @@
+{
+ "<src.process.Process object at 0x70f22db121a0>": "process M1 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db12590>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf4/all_subworkflows.json b/tests/ressources/workflows/wf4/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..53eed4112cfe534ef2ef7195ff4a16a8b5b13c8a
--- /dev/null
+++ b/tests/ressources/workflows/wf4/all_subworkflows.json
@@ -0,0 +1,3 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db13940>": "workflow sub1 {\n take:\n a\n\n main:\n M1(a)\n M2(M1.out)\n\n emit:\n M2.out\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf4/executors_per_subworkflows.json b/tests/ressources/workflows/wf4/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9513f23043319c0c9d16bc50c507e9fb1e3ad27e
--- /dev/null
+++ b/tests/ressources/workflows/wf4/executors_per_subworkflows.json
@@ -0,0 +1,6 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db13940>": {
+ "Call_124185450986560": "M1(a)",
+ "Call_124185450981760": "M2(M1.out)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf4/specification_graph.json b/tests/ressources/workflows/wf4/specification_graph.json
index fa988c3f7b86b572c1956ee3235062cad4949467..070eca9948f697c2524808b62426ce6890c6af85 100644
--- a/tests/ressources/workflows/wf4/specification_graph.json
+++ b/tests/ressources/workflows/wf4/specification_graph.json
@@ -1,7 +1,7 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a496170>",
+ "id": "<src.operation.Operation object at 0x70f22db13a30>",
"name": "",
"shape": "point",
"xlabel": "Channel.empty()",
@@ -10,8 +10,8 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a496170>",
- "B": "<src.operation.Operation object at 0x71ee1a4975e0>",
+ "A": "<src.operation.Operation object at 0x70f22db13a30>",
+ "B": "<src.operation.Operation object at 0x70f22db125c0>",
"label": ""
}
],
@@ -19,42 +19,42 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a4973a0>",
+ "id": "<src.process.Process object at 0x70f22db121a0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4968c0>",
+ "id": "<src.operation.Operation object at 0x70f22db12a10>",
"name": "",
"shape": "point",
"xlabel": "a",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a496f50>",
+ "id": "<src.process.Process object at 0x70f22db12590>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496380>",
+ "id": "<src.operation.Operation object at 0x70f22db12920>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4975e0>",
+ "id": "<src.operation.Operation object at 0x70f22db125c0>",
"name": "",
"shape": "point",
"xlabel": "take: a",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a287b20>",
+ "id": "<src.operation.Operation object at 0x70f22db13f10>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -63,28 +63,28 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a4975e0>",
- "B": "<src.operation.Operation object at 0x71ee1a4968c0>",
+ "A": "<src.operation.Operation object at 0x70f22db125c0>",
+ "B": "<src.operation.Operation object at 0x70f22db12a10>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4968c0>",
- "B": "<src.process.Process object at 0x71ee1a4973a0>",
+ "A": "<src.operation.Operation object at 0x70f22db12a10>",
+ "B": "<src.process.Process object at 0x70f22db121a0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a4973a0>",
- "B": "<src.operation.Operation object at 0x71ee1a496380>",
+ "A": "<src.process.Process object at 0x70f22db121a0>",
+ "B": "<src.operation.Operation object at 0x70f22db12920>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a496380>",
- "B": "<src.process.Process object at 0x71ee1a496f50>",
+ "A": "<src.operation.Operation object at 0x70f22db12920>",
+ "B": "<src.process.Process object at 0x70f22db12590>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a496f50>",
- "B": "<src.operation.Operation object at 0x71ee1a287b20>",
+ "A": "<src.process.Process object at 0x70f22db12590>",
+ "B": "<src.operation.Operation object at 0x70f22db13f10>",
"label": "M2.out"
}
],
diff --git a/tests/ressources/workflows/wf5/all_executors.json b/tests/ressources/workflows/wf5/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..a6b1236d71db412cfbd8da1322b3707d2c0bcebe
--- /dev/null
+++ b/tests/ressources/workflows/wf5/all_executors.json
@@ -0,0 +1,5 @@
+{
+ "<src.operation.Operation object at 0x70f22db13e20>": "c = sub1(Channel.empty())",
+ "Call_124185450981088": "M1(a)",
+ "Call_124185450973360": "M2(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf5/all_processes.json b/tests/ressources/workflows/wf5/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..bcac77b5426feda8535a7745d6e38106a5ce3766
--- /dev/null
+++ b/tests/ressources/workflows/wf5/all_processes.json
@@ -0,0 +1,4 @@
+{
+ "<src.process.Process object at 0x70f22db142e0>": "process M1 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db14610>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf5/all_subworkflows.json b/tests/ressources/workflows/wf5/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..1f24d0bd9e536675148be2bfb5e0eeca5893799b
--- /dev/null
+++ b/tests/ressources/workflows/wf5/all_subworkflows.json
@@ -0,0 +1,3 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db13820>": "workflow sub1 {\n take:\n a\n\n main:\n M1(a)\n M2(M1.out)\n\n emit:\n M2.out\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf5/executors_per_subworkflows.json b/tests/ressources/workflows/wf5/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..2631f107849eb210ee70ca796ff505908f955995
--- /dev/null
+++ b/tests/ressources/workflows/wf5/executors_per_subworkflows.json
@@ -0,0 +1,6 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db13820>": {
+ "Call_124185450981088": "M1(a)",
+ "Call_124185450973360": "M2(M1.out)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf5/specification_graph.json b/tests/ressources/workflows/wf5/specification_graph.json
index 259eca243f6974bbfcc79453ee3a08157b9cd8aa..cd05741c7afc11d2dbe59d3cca7098f2553090e7 100644
--- a/tests/ressources/workflows/wf5/specification_graph.json
+++ b/tests/ressources/workflows/wf5/specification_graph.json
@@ -1,14 +1,14 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a4a4df0>",
+ "id": "<src.operation.Operation object at 0x70f22db13e20>",
"name": "",
"shape": "point",
"xlabel": "c = sub1(Channel.empty())",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a498b20>",
+ "id": "<src.operation.Operation object at 0x70f22db154e0>",
"name": "",
"shape": "point",
"xlabel": "Channel.empty()",
@@ -17,13 +17,13 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a498b20>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4b20>",
+ "A": "<src.operation.Operation object at 0x70f22db154e0>",
+ "B": "<src.operation.Operation object at 0x70f22db11cf0>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4982e0>",
- "B": "<src.operation.Operation object at 0x71ee1a4a4df0>",
+ "A": "<src.operation.Operation object at 0x70f22db13b20>",
+ "B": "<src.operation.Operation object at 0x70f22db13e20>",
"label": "emit: M2.out"
}
],
@@ -31,42 +31,42 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a4a47f0>",
+ "id": "<src.process.Process object at 0x70f22db142e0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a498730>",
+ "id": "<src.operation.Operation object at 0x70f22db144f0>",
"name": "",
"shape": "point",
"xlabel": "a",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a498040>",
+ "id": "<src.process.Process object at 0x70f22db14610>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a498250>",
+ "id": "<src.operation.Operation object at 0x70f22db14190>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4a4b20>",
+ "id": "<src.operation.Operation object at 0x70f22db11cf0>",
"name": "",
"shape": "point",
"xlabel": "take: a",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4982e0>",
+ "id": "<src.operation.Operation object at 0x70f22db13b20>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -75,28 +75,28 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a4a4b20>",
- "B": "<src.operation.Operation object at 0x71ee1a498730>",
+ "A": "<src.operation.Operation object at 0x70f22db11cf0>",
+ "B": "<src.operation.Operation object at 0x70f22db144f0>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a498730>",
- "B": "<src.process.Process object at 0x71ee1a4a47f0>",
+ "A": "<src.operation.Operation object at 0x70f22db144f0>",
+ "B": "<src.process.Process object at 0x70f22db142e0>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a4a47f0>",
- "B": "<src.operation.Operation object at 0x71ee1a498250>",
+ "A": "<src.process.Process object at 0x70f22db142e0>",
+ "B": "<src.operation.Operation object at 0x70f22db14190>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a498250>",
- "B": "<src.process.Process object at 0x71ee1a498040>",
+ "A": "<src.operation.Operation object at 0x70f22db14190>",
+ "B": "<src.process.Process object at 0x70f22db14610>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a498040>",
- "B": "<src.operation.Operation object at 0x71ee1a4982e0>",
+ "A": "<src.process.Process object at 0x70f22db14610>",
+ "B": "<src.operation.Operation object at 0x70f22db13b20>",
"label": "M2.out"
}
],
diff --git a/tests/ressources/workflows/wf6/all_executors.json b/tests/ressources/workflows/wf6/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..6ef2abce95f28409157a290566e1e16a7da9f1c8
--- /dev/null
+++ b/tests/ressources/workflows/wf6/all_executors.json
@@ -0,0 +1,7 @@
+{
+ "<src.operation.Operation object at 0x70f22db13160>": "c = sub1(a)",
+ "<src.operation.Operation object at 0x70f22db12aa0>": "a = 1",
+ "<src.operation.Operation object at 0x70f22db138e0>": "a = Channel.empty()",
+ "Call_124185450987232": "M1(a)",
+ "Call_124185450972640": "M2(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf6/all_processes.json b/tests/ressources/workflows/wf6/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..76236a2a06220b4a1a33b70a26a1f821e88cb008
--- /dev/null
+++ b/tests/ressources/workflows/wf6/all_processes.json
@@ -0,0 +1,4 @@
+{
+ "<src.process.Process object at 0x70f22db13400>": "process M1 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db12650>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf6/all_subworkflows.json b/tests/ressources/workflows/wf6/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..1daf2ef5c027ec0313b005e28be046b50c08b4d3
--- /dev/null
+++ b/tests/ressources/workflows/wf6/all_subworkflows.json
@@ -0,0 +1,3 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db12740>": "workflow sub1 {\n take:\n a\n\n main:\n M1(a)\n M2(M1.out)\n\n emit:\n M2.out\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf6/executors_per_subworkflows.json b/tests/ressources/workflows/wf6/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..308091fac4e2a3ce999a52c1d2ea6672271f88d3
--- /dev/null
+++ b/tests/ressources/workflows/wf6/executors_per_subworkflows.json
@@ -0,0 +1,6 @@
+{
+ "<src.subworkflow.Subworkflow object at 0x70f22db12740>": {
+ "Call_124185450987232": "M1(a)",
+ "Call_124185450972640": "M2(M1.out)"
+ }
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf6/specification_graph.json b/tests/ressources/workflows/wf6/specification_graph.json
index 42a0511d6c2760307c8b6e7c33fb8cbf7107b8c2..c533035822ed79dd22911ff5773c0c78a6a44ba9 100644
--- a/tests/ressources/workflows/wf6/specification_graph.json
+++ b/tests/ressources/workflows/wf6/specification_graph.json
@@ -1,28 +1,28 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a497bb0>",
+ "id": "<src.operation.Operation object at 0x70f22db12aa0>",
"name": "",
"shape": "point",
"xlabel": "a = 1",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a497010>",
+ "id": "<src.operation.Operation object at 0x70f22db138e0>",
"name": "",
"shape": "point",
"xlabel": "a = Channel.empty()",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496200>",
+ "id": "<src.operation.Operation object at 0x70f22db13160>",
"name": "",
"shape": "point",
"xlabel": "c = sub1(a)",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496da0>",
+ "id": "<src.operation.Operation object at 0x70f22db12470>",
"name": "",
"shape": "point",
"xlabel": "a",
@@ -31,23 +31,23 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a497bb0>",
- "B": "<src.operation.Operation object at 0x71ee1a496da0>",
+ "A": "<src.operation.Operation object at 0x70f22db12aa0>",
+ "B": "<src.operation.Operation object at 0x70f22db12470>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a497010>",
- "B": "<src.operation.Operation object at 0x71ee1a496da0>",
+ "A": "<src.operation.Operation object at 0x70f22db138e0>",
+ "B": "<src.operation.Operation object at 0x70f22db12470>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a496da0>",
- "B": "<src.operation.Operation object at 0x71ee1a496350>",
+ "A": "<src.operation.Operation object at 0x70f22db12470>",
+ "B": "<src.operation.Operation object at 0x70f22db11210>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a496950>",
- "B": "<src.operation.Operation object at 0x71ee1a496200>",
+ "A": "<src.operation.Operation object at 0x70f22db13b50>",
+ "B": "<src.operation.Operation object at 0x70f22db13160>",
"label": "emit: M2.out"
}
],
@@ -55,42 +55,42 @@
"sub1_0": {
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a496a70>",
+ "id": "<src.process.Process object at 0x70f22db13400>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496b00>",
+ "id": "<src.operation.Operation object at 0x70f22db13d90>",
"name": "",
"shape": "point",
"xlabel": "a",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a496b30>",
+ "id": "<src.process.Process object at 0x70f22db12650>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a4970a0>",
+ "id": "<src.operation.Operation object at 0x70f22db13520>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496350>",
+ "id": "<src.operation.Operation object at 0x70f22db11210>",
"name": "",
"shape": "point",
"xlabel": "take: a",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496950>",
+ "id": "<src.operation.Operation object at 0x70f22db13b50>",
"name": "",
"shape": "point",
"xlabel": "emit: M2.out",
@@ -99,28 +99,28 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a496350>",
- "B": "<src.operation.Operation object at 0x71ee1a496b00>",
+ "A": "<src.operation.Operation object at 0x70f22db11210>",
+ "B": "<src.operation.Operation object at 0x70f22db13d90>",
"label": "a"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a496b00>",
- "B": "<src.process.Process object at 0x71ee1a496a70>",
+ "A": "<src.operation.Operation object at 0x70f22db13d90>",
+ "B": "<src.process.Process object at 0x70f22db13400>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a496a70>",
- "B": "<src.operation.Operation object at 0x71ee1a4970a0>",
+ "A": "<src.process.Process object at 0x70f22db13400>",
+ "B": "<src.operation.Operation object at 0x70f22db13520>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a4970a0>",
- "B": "<src.process.Process object at 0x71ee1a496b30>",
+ "A": "<src.operation.Operation object at 0x70f22db13520>",
+ "B": "<src.process.Process object at 0x70f22db12650>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a496b30>",
- "B": "<src.operation.Operation object at 0x71ee1a496950>",
+ "A": "<src.process.Process object at 0x70f22db12650>",
+ "B": "<src.operation.Operation object at 0x70f22db13b50>",
"label": "M2.out"
}
],
diff --git a/tests/ressources/workflows/wf7/all_executors.json b/tests/ressources/workflows/wf7/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..b5d58045332e619fcc144a8a39cae987c0631583
--- /dev/null
+++ b/tests/ressources/workflows/wf7/all_executors.json
@@ -0,0 +1,4 @@
+{
+ "Call_124185450030048": "M1(Channel.empty())",
+ "Call_124185450119376": "M2(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf7/all_processes.json b/tests/ressources/workflows/wf7/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..22f48e2d5dbc044c83a86b20658b8dda00efbe6e
--- /dev/null
+++ b/tests/ressources/workflows/wf7/all_processes.json
@@ -0,0 +1,4 @@
+{
+ "<src.process.Process object at 0x70f22e6106d0>": "process M1 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22dac8eb0>": "process M2 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf7/all_subworkflows.json b/tests/ressources/workflows/wf7/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf7/all_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf7/executors_per_subworkflows.json b/tests/ressources/workflows/wf7/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf7/executors_per_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf7/specification_graph.json b/tests/ressources/workflows/wf7/specification_graph.json
index 216264373f0df3533f9f99c26f0c0b1ae521c613..8824d27bb01ebe38cccddffc93ed6a7b3e8923a7 100644
--- a/tests/ressources/workflows/wf7/specification_graph.json
+++ b/tests/ressources/workflows/wf7/specification_graph.json
@@ -1,28 +1,28 @@
{
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a496170>",
+ "id": "<src.process.Process object at 0x70f22dac8eb0>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496470>",
+ "id": "<src.operation.Operation object at 0x70f22dac9060>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a494880>",
+ "id": "<src.process.Process object at 0x70f22e6106d0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a495bd0>",
+ "id": "<src.operation.Operation object at 0x70f22e610310>",
"name": "",
"shape": "point",
"xlabel": "Channel.empty()",
@@ -31,18 +31,18 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a494880>",
- "B": "<src.operation.Operation object at 0x71ee1a496470>",
+ "A": "<src.process.Process object at 0x70f22e6106d0>",
+ "B": "<src.operation.Operation object at 0x70f22dac9060>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a496470>",
- "B": "<src.process.Process object at 0x71ee1a496170>",
+ "A": "<src.operation.Operation object at 0x70f22dac9060>",
+ "B": "<src.process.Process object at 0x70f22dac8eb0>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a495bd0>",
- "B": "<src.process.Process object at 0x71ee1a494880>",
+ "A": "<src.operation.Operation object at 0x70f22e610310>",
+ "B": "<src.process.Process object at 0x70f22e6106d0>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf8/all_executors.json b/tests/ressources/workflows/wf8/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..a3f231b94784518815c60c35fa97dd6f6291ebd5
--- /dev/null
+++ b/tests/ressources/workflows/wf8/all_executors.json
@@ -0,0 +1,4 @@
+{
+ "Call_124185450937408": "M2(M1())",
+ "Call_124185450936736": "M3(M1.out)"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf8/all_processes.json b/tests/ressources/workflows/wf8/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..d917e4d2a0b08cc07eb53cced699e186b5285755
--- /dev/null
+++ b/tests/ressources/workflows/wf8/all_processes.json
@@ -0,0 +1,5 @@
+{
+ "<src.process.Process object at 0x70f22db07a90>": "process M2 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db121d0>": "process M1 {\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}",
+ "<src.process.Process object at 0x70f22db07ee0>": "process M3 {\n input:\n path a\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf8/all_subworkflows.json b/tests/ressources/workflows/wf8/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf8/all_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf8/executors_per_subworkflows.json b/tests/ressources/workflows/wf8/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf8/executors_per_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf8/specification_graph.json b/tests/ressources/workflows/wf8/specification_graph.json
index 46978b07d59b56bf2bd95a7e048eb5476eda1f7c..2f44f4335bfd38f495ac5274a14aa5d465b13e5f 100644
--- a/tests/ressources/workflows/wf8/specification_graph.json
+++ b/tests/ressources/workflows/wf8/specification_graph.json
@@ -1,35 +1,35 @@
{
"nodes": [
{
- "id": "<src.process.Process object at 0x71ee1a496050>",
+ "id": "<src.process.Process object at 0x70f22db07a90>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a496410>",
+ "id": "<src.operation.Operation object at 0x70f22d955ba0>",
"name": "",
"shape": "point",
"xlabel": "M1()",
"fillcolor": "white"
},
{
- "id": "<src.process.Process object at 0x71ee1a2400a0>",
+ "id": "<src.process.Process object at 0x70f22db121d0>",
"name": "M1",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a495780>",
+ "id": "<src.process.Process object at 0x70f22db07ee0>",
"name": "M3",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a243580>",
+ "id": "<src.operation.Operation object at 0x70f22db12140>",
"name": "",
"shape": "point",
"xlabel": "M1.out",
@@ -38,23 +38,23 @@
],
"edges": [
{
- "A": "<src.process.Process object at 0x71ee1a2400a0>",
- "B": "<src.operation.Operation object at 0x71ee1a496410>",
+ "A": "<src.process.Process object at 0x70f22db121d0>",
+ "B": "<src.operation.Operation object at 0x70f22d955ba0>",
"label": ""
},
{
- "A": "<src.operation.Operation object at 0x71ee1a496410>",
- "B": "<src.process.Process object at 0x71ee1a496050>",
+ "A": "<src.operation.Operation object at 0x70f22d955ba0>",
+ "B": "<src.process.Process object at 0x70f22db07a90>",
"label": ""
},
{
- "A": "<src.process.Process object at 0x71ee1a2400a0>",
- "B": "<src.operation.Operation object at 0x71ee1a243580>",
+ "A": "<src.process.Process object at 0x70f22db121d0>",
+ "B": "<src.operation.Operation object at 0x70f22db12140>",
"label": "M1.out"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a243580>",
- "B": "<src.process.Process object at 0x71ee1a495780>",
+ "A": "<src.operation.Operation object at 0x70f22db12140>",
+ "B": "<src.process.Process object at 0x70f22db07ee0>",
"label": ""
}
],
diff --git a/tests/ressources/workflows/wf9/all_executors.json b/tests/ressources/workflows/wf9/all_executors.json
new file mode 100644
index 0000000000000000000000000000000000000000..47ff6975fe23a048480fd3a870402266201734b3
--- /dev/null
+++ b/tests/ressources/workflows/wf9/all_executors.json
@@ -0,0 +1,5 @@
+{
+ "Call_124185450797840": "M2(ch2)",
+ "<src.operation.Operation object at 0x70f22e6ab580>": "ch2 = Channel.empty()",
+ "<src.operation.Operation object at 0x70f22e6abd00>": "ch2 = Channel.empty()"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf9/all_processes.json b/tests/ressources/workflows/wf9/all_processes.json
new file mode 100644
index 0000000000000000000000000000000000000000..71e52a262efb776c3ed2e87a9c99511872f8eda5
--- /dev/null
+++ b/tests/ressources/workflows/wf9/all_processes.json
@@ -0,0 +1,3 @@
+{
+ "<src.process.Process object at 0x70f22e6aa170>": "process M2 {\n input:\n path a\n\n output:\n path 'chunk_*'\n\n \"\"\"\n SOMETHING\n \"\"\"\n}"
+}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf9/all_subworkflows.json b/tests/ressources/workflows/wf9/all_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf9/all_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf9/executors_per_subworkflows.json b/tests/ressources/workflows/wf9/executors_per_subworkflows.json
new file mode 100644
index 0000000000000000000000000000000000000000..9e26dfeeb6e641a33dae4961196235bdb965b21b
--- /dev/null
+++ b/tests/ressources/workflows/wf9/executors_per_subworkflows.json
@@ -0,0 +1 @@
+{}
\ No newline at end of file
diff --git a/tests/ressources/workflows/wf9/specification_graph.json b/tests/ressources/workflows/wf9/specification_graph.json
index c9cc76ac79a262fa8a9936acd5c40ab6e27b8608..0bd85a00ac8cc693effdabaf3cd1bda1966167b4 100644
--- a/tests/ressources/workflows/wf9/specification_graph.json
+++ b/tests/ressources/workflows/wf9/specification_graph.json
@@ -1,28 +1,28 @@
{
"nodes": [
{
- "id": "<src.operation.Operation object at 0x71ee1a53b1c0>",
+ "id": "<src.operation.Operation object at 0x70f22e6ab580>",
"name": "",
"shape": "point",
"xlabel": "ch2 = Channel.empty()",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a32ff10>",
+ "id": "<src.operation.Operation object at 0x70f22e6abd00>",
"name": "",
"shape": "point",
"xlabel": "ch2 = Channel.empty()",
"fillcolor": ""
},
{
- "id": "<src.process.Process object at 0x71ee1a53b2b0>",
+ "id": "<src.process.Process object at 0x70f22e6aa170>",
"name": "M2",
"shape": "ellipse",
"xlabel": "",
"fillcolor": ""
},
{
- "id": "<src.operation.Operation object at 0x71ee1a268850>",
+ "id": "<src.operation.Operation object at 0x70f22e6aba30>",
"name": "",
"shape": "point",
"xlabel": "ch2",
@@ -31,18 +31,18 @@
],
"edges": [
{
- "A": "<src.operation.Operation object at 0x71ee1a53b1c0>",
- "B": "<src.operation.Operation object at 0x71ee1a268850>",
+ "A": "<src.operation.Operation object at 0x70f22e6ab580>",
+ "B": "<src.operation.Operation object at 0x70f22e6aba30>",
"label": "ch2"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a32ff10>",
- "B": "<src.operation.Operation object at 0x71ee1a268850>",
+ "A": "<src.operation.Operation object at 0x70f22e6abd00>",
+ "B": "<src.operation.Operation object at 0x70f22e6aba30>",
"label": "ch2"
},
{
- "A": "<src.operation.Operation object at 0x71ee1a268850>",
- "B": "<src.process.Process object at 0x71ee1a53b2b0>",
+ "A": "<src.operation.Operation object at 0x70f22e6aba30>",
+ "B": "<src.process.Process object at 0x70f22e6aa170>",
"label": ""
}
],
diff --git a/tests/test_executor_extraction_per_subworkflow.py b/tests/test_executor_extraction_per_subworkflow.py
new file mode 100644
index 0000000000000000000000000000000000000000..74a7b9187d44df2e4d349a39f27de013eaba6bc1
--- /dev/null
+++ b/tests/test_executor_extraction_per_subworkflow.py
@@ -0,0 +1,349 @@
+import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_Executor_Extraction_Per_Subworkflow(unittest.TestCase):
+
+ def test_wf6_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf6", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf6/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf1_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf1", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf1/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf18_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf18", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf18/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf13_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf13", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf13/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf8_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf8", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf8/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf3_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf3", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf3/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf2_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf2", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf2/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf5_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf5", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf5/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf16_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf16", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf16/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf12_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf12", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf12/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf10_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf10", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf10/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf9_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf9", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf9/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf7_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf7", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf7/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf4_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf4", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf4/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf15_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf15", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf15/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf17_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf17", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf17/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf14_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf14", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf14/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
+ def test_wf11_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf11", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf11/executors_per_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+ saved_sets = []
+ for sub in saved:
+ saved_sets.append(set(saved[sub].values()))
+
+ subs = w.get_subworkflows_called()
+ dico= {}
+ for s in subs:
+ executors = s.get_all_executors_in_workflow()
+ executors_vals = []
+ for e in executors:
+ executors_vals.append(e.get_code(get_OG = True))
+ self.assertTrue(set(executors_vals) in saved_sets)
+
\ No newline at end of file
diff --git a/tests/test_process_extraction.py b/tests/test_process_extraction.py
new file mode 100644
index 0000000000000000000000000000000000000000..06faeefd0507c9cb7365ce5ff232db0dae064dee
--- /dev/null
+++ b/tests/test_process_extraction.py
@@ -0,0 +1,259 @@
+import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_Process_Extraction(unittest.TestCase):
+
+ def test_wf6_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf6", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf6/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf1_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf1", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf1/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf18_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf18", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf18/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf13_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf13", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf13/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf8_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf8", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf8/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf3_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf3", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf3/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf2_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf2", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf2/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf5_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf5", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf5/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf16_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf16", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf16/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf12_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf12", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf12/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf10_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf10", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf10/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf9_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf9", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf9/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf7_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf7", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf7/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf4_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf4", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf4/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf15_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf15", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf15/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf17_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf17", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf17/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf14_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf14", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf14/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf11_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf11", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf11/all_processes.json') as json_file:
+ saved = json.load(json_file)
+
+ processes = w.get_processes_called()
+ dico= {}
+ for e in processes:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
\ No newline at end of file
diff --git a/tests/test_subworkflow_extraction.py b/tests/test_subworkflow_extraction.py
new file mode 100644
index 0000000000000000000000000000000000000000..b7db0b072b811ec24f479ff2fd6b6dd411ac4a9f
--- /dev/null
+++ b/tests/test_subworkflow_extraction.py
@@ -0,0 +1,259 @@
+import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_Subworkflow_Extraction(unittest.TestCase):
+
+ def test_wf6_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf6", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf6/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf1_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf1", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf1/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf18_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf18", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf18/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf13_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf13", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf13/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf8_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf8", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf8/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf3_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf3", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf3/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf2_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf2", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf2/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf5_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf5", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf5/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf16_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf16", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf16/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf12_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf12", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf12/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf10_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf10", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf10/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf9_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf9", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf9/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf7_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf7", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf7/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf4_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf4", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf4/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf15_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf15", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf15/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf17_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf17", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf17/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf14_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf14", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf14/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf11_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf11", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf11/all_subworkflows.json') as json_file:
+ saved = json.load(json_file)
+
+ subworkflows = w.get_subworkflows_called()
+ dico= {}
+ for e in subworkflows:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
\ No newline at end of file
diff --git a/tests/test_workflows_all_executors.py b/tests/test_workflows_all_executors.py
new file mode 100644
index 0000000000000000000000000000000000000000..40231b28cd67398a3de40944a18ab89fda715657
--- /dev/null
+++ b/tests/test_workflows_all_executors.py
@@ -0,0 +1,259 @@
+import unittest
+import json
+import glob
+from src.workflow import Workflow
+
+class Test_All_Executors_Extraction(unittest.TestCase):
+
+ def test_wf6_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf6", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf6/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf1_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf1", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf1/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf18_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf18", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf18/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf13_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf13", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf13/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf8_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf8", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf8/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf3_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf3", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf3/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf2_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf2", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf2/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf5_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf5", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf5/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf16_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf16", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf16/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf12_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf12", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf12/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf10_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf10", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf10/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf9_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf9", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf9/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf7_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf7", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf7/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf4_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf4", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf4/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf15_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf15", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf15/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf17_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf17", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf17/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf14_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf14", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf14/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
+ def test_wf11_extraction(self):
+ w = Workflow(f"tests/ressources/workflows/wf11", display_info=False, duplicate=True)
+ w.initialise()
+
+ with open('tests/ressources/workflows/wf11/all_executors.json') as json_file:
+ saved = json.load(json_file)
+
+ executors = w.get_workflow_main().get_all_executors_in_workflow()
+ dico= {}
+ for e in executors:
+ dico[str(e)] = e.get_code(get_OG = True)
+
+ self.assertTrue(set(dico.values())==set(saved.values()))
+
\ No newline at end of file
diff --git a/tests/test_workflows_simple_duplicate.py b/tests/test_workflows_simple_duplicate.py
index 9f2685ea23108a13343178ac1e1828460c4fbb3a..730c593ab67f02184c0d947e24bf9cc0c3ebc510 100644
--- a/tests/test_workflows_simple_duplicate.py
+++ b/tests/test_workflows_simple_duplicate.py
@@ -7,108 +7,90 @@ class TestWorkflows(unittest.TestCase):
def test_wfwf6_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf6", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf6/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf6/specification_graph.json'))
def test_wfwf1_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf1", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf1/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf1/specification_graph.json'))
def test_wfwf18_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf18", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf18/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf18/specification_graph.json'))
def test_wfwf13_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf13", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf13/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf13/specification_graph.json'))
def test_wfwf8_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf8", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf8/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf8/specification_graph.json'))
def test_wfwf3_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf3", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf3/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf3/specification_graph.json'))
def test_wfwf2_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf2", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf2/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf2/specification_graph.json'))
def test_wfwf5_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf5", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf5/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf5/specification_graph.json'))
def test_wfwf16_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf16", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf16/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf16/specification_graph.json'))
def test_wfwf12_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf12", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf12/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf12/specification_graph.json'))
def test_wfwf10_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf10", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf10/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf10/specification_graph.json'))
def test_wfwf9_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf9", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf9/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf9/specification_graph.json'))
def test_wfwf7_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf7", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf7/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf7/specification_graph.json'))
def test_wfwf4_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf4", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf4/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf4/specification_graph.json'))
def test_wfwf15_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf15", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf15/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf15/specification_graph.json'))
def test_wfwf17_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf17", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf17/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf17/specification_graph.json'))
def test_wfwf14_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf14", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf14/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf14/specification_graph.json'))
def test_wfwf11_simple_duplicate(self):
w = Workflow(f"tests/ressources/workflows/wf11", display_info=False, duplicate=True)
w.initialise()
- json_files = glob.glob(f'tests/ressources/workflows/wf11/*.json', recursive=False)
- self.assertTrue(w.check_if_equal(json_files[0]))
+ self.assertTrue(w.check_if_equal('tests/ressources/workflows/wf11/specification_graph.json'))
\ No newline at end of file