diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index f15b634502fef608302d7b32b4edfacac058acd1..d63b2caa56ca46160aaf755b7037bb70d7e2facb 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -1,6 +1,7 @@ run_tests: image: "python:$VERSION" script: + - apt update && apt install -y graphviz - pip install -e .[dev] - export PYTHONPATH="$(pwd)" - coverage run --source . run_tests.py diff --git a/tests/test_cli.py b/tests/test_cli.py index fab491414d834305052fd08aa103e34ec896991f..981deae94728cb080034e0b42dee5576b09a6505 100644 --- a/tests/test_cli.py +++ b/tests/test_cli.py @@ -7,8 +7,8 @@ from bioflow_insight_cli.main import cli class TestCall(unittest.TestCase): def test_cli_works(self): - #cli("./wf_test/main.nf", render_graphs=False) cli("./wf_test/main.nf", render_graphs=False) + cli("./wf_test/main.nf", render_graphs=True) def test_cli_output_considered(self): with TemporaryDirectory() as my_temp_dir: