From 712858d1a8b0f66ca5eef0540aaf284802af499b Mon Sep 17 00:00:00 2001
From: George Marchment <georgemarchment@yahoo.fr>
Date: Mon, 2 Dec 2024 08:48:54 +0100
Subject: [PATCH] Commented line to generate pos dot file
---
src/outils_graph.py | 4 ++--
src/process.py | 3 ++-
2 files changed, 4 insertions(+), 3 deletions(-)
diff --git a/src/outils_graph.py b/src/outils_graph.py
index f1da30a..b754f91 100644
--- a/src/outils_graph.py
+++ b/src/outils_graph.py
@@ -146,8 +146,8 @@ def generate_graph_dot(filename, dico, label_node = True, label_edge = True, ren
fill_dot(dot, dico, label_node, label_edge)
#metro_dot(dot, dico, relevant_nodes = relevant_nodes)
dot.save(filename=f'{filename}.dot')
- dot.format = 'dot'
- dot.render(filename=f'{filename}_pos')
+ #dot.format = 'dot'
+ #dot.render(filename=f'{filename}_pos')
if(render_graphs):
dot.render(filename=f'{filename}.dot', outfile=f'{filename}.png')
diff --git a/src/process.py b/src/process.py
index d593bd5..4648523 100644
--- a/src/process.py
+++ b/src/process.py
@@ -461,7 +461,8 @@ class Process(Nextflow_Building_Blocks):
self.initialise_name()
self.initialise_parts()
self.initialise_inputs_outputs()
- annotations = self.get_processes_annotation()
+ #annotations = self.get_processes_annotation()
+ annotations = None
if(annotations!=None):
self.tools = annotations[self.get_code()]["tools"]
self.commands = annotations[self.get_code()]["commands"]
--
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