From 75231f53fee521799669470e3e0b8b2bf384dc61 Mon Sep 17 00:00:00 2001
From: George Marchment <georgemarchment@yahoo.fr>
Date: Mon, 11 Mar 2024 14:53:10 +0100
Subject: [PATCH] test
---
src/bioflowinsighterror.py | 4 ++--
src/nextflow_file.py | 1 +
2 files changed, 3 insertions(+), 2 deletions(-)
diff --git a/src/bioflowinsighterror.py b/src/bioflowinsighterror.py
index dd222bb..df181ec 100644
--- a/src/bioflowinsighterror.py
+++ b/src/bioflowinsighterror.py
@@ -4,9 +4,9 @@ class BioFlowInsightError(Exception):
self.origin = origin
#TODO -> add message at the end
if(origin!=None):
- super().__init__(f"[{num}] Error in the file '{self.origin.get_file_address()}': "+error)
+ super().__init__(f"{'\033[91m'}[{num}] Error in the file '{self.origin.get_file_address()}': "+error+'\033[0m')
else:
- super().__init__(f"[{num}] {error}")
+ super().__init__(f"{'\033[91m'}[{num}] {error}{'\033[0m'}")
#To handle the different type of errors; I'm gonna add numbers to the errors
#Pair numbers if it's the users fault
diff --git a/src/nextflow_file.py b/src/nextflow_file.py
index 4f04aca..9a026ff 100644
--- a/src/nextflow_file.py
+++ b/src/nextflow_file.py
@@ -23,6 +23,7 @@ from .bioflowinsighterror import BioFlowInsightError
class Nextflow_File(Nextflow_Building_Blocks):
def __init__(self, address, duplicate = True, DSL="", author = None, name = None, origin=None, output_dir='./results', display_info = True):
self.file = address
+ print(self.get_file_address())
if(self.get_file_address().find('/')!=-1):
raise BioFlowInsightError(f"BioFlow-Insight cannot directly analyse a workflow from its directory. Please analyse the workflow from the parent directory instead.", num = -1)
--
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