diff --git a/tests/test_channel.py b/tests/test_channel.py index b5c5547f7b3b336b32f05a52adcc053af4af27d9..b823d57b323a84889cd4eb09898c493903bd8612 100644 --- a/tests/test_channel.py +++ b/tests/test_channel.py @@ -3,26 +3,34 @@ from src.channel import * from src.nextflow_file import Nextflow_File +class EmptyNextflowFile(Nextflow_File): + def __init__(self, address="tests/ressources/channel/empty_wf.nf", display_info=False, *args, **kwargs): + super().__init__(address=address, display_info=display_info, *args, **kwargs) + + def check_file_correctness_after_DSL(self): + return + + class TestChannel(unittest.TestCase): def test_get_code(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) self.assertIsInstance(ch1, Channel) self.assertEqual(ch1.get_code(), "ch1") def test_get_name(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) self.assertEqual(ch1.get_name(), "ch1") def test_get_type(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) self.assertEqual(ch1.get_type(), "Channel") def test_add_source(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) self.assertEqual(ch1.get_source(), []) ele = "This is a test" @@ -30,7 +38,7 @@ class TestChannel(unittest.TestCase): self.assertEqual(ch1.get_source(), [ele]) def test_add_sink(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) self.assertEqual(ch1.get_sink(), []) ele = "This is a test" @@ -38,7 +46,7 @@ class TestChannel(unittest.TestCase): self.assertEqual(ch1.get_sink(), [ele]) def test_set_sink_null(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) ele = "This is a test" ch1.add_sink(ele) @@ -47,7 +55,7 @@ class TestChannel(unittest.TestCase): self.assertEqual(ch1.get_sink(), []) def test_remove_element_from_sink(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) ele = "This is a test" ch1.add_sink(ele) @@ -56,7 +64,7 @@ class TestChannel(unittest.TestCase): self.assertEqual(ch1.get_sink(), []) def test_equal(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) ch1_1 = Channel(name = "ch1", origin = wf1) ch2 = Channel(name = "ch2", origin = wf1) @@ -64,7 +72,7 @@ class TestChannel(unittest.TestCase): self.assertFalse(ch1.equal(channel=ch2)) def test_get_structure(self): - wf1 = Nextflow_File("tests/ressources/channel/empty_wf.nf", display_info=False) + wf1 = EmptyNextflowFile() ch1 = Channel(name = "ch1", origin = wf1) dico = {} dico['nodes'] = []