diff --git a/src/workflow.py b/src/workflow.py index 61ef47763a73dfab5c1aac5153d54fcdeb661d80..6b9e1757c35f3aaf3d83fe123d26132156a23ff3 100644 --- a/src/workflow.py +++ b/src/workflow.py @@ -35,7 +35,10 @@ class Workflow: def fill_log(self): current_directory = os.getcwd() - os.chdir("/".join(self.nextflow_file.get_file_address().split("/")[:-1])) + repo = "/".join(self.nextflow_file.get_file_address().split("/")[:-1]) + if(repo==''): + repo = current_directory + os.chdir(repo) try: os.system(f"git log --reverse > temp_{id(self)}.txt") with open(f'temp_{id(self)}.txt') as f: