add command lines (NYF)

README.md

@@ -9,11 +9,39 @@ Let us denote by SRC_DIR the root directory of the gitlab repository.
 # 1. Install Required Dependencies
 
    * [CGAL](https://www.cgal.org/), with component Qt5
+      Tested with master version 2b547ec58a9e34458792cb3f09ead399bb6dd075
+      (cgal master, May 17th 2022)
    * [Boost](https://www.boost.org/), with components system and filesystem
    * [Qt5](https://www.qt.io/)
    * [TetGen](https://wias-berlin.de/software/index.jsp?id=TetGen&lang=1)
+
+# 2. List of commands for Ubuntu 22.04
+
+If you want to use docker:
+
+   * docker pull ubuntu:22.04
+   * docker run -it  ubuntu:22.04
+   * (docker commit to save the state of a container)
    
-# 2. Compile the Two Programs ```hexa-subdivision``` and ```tetra-to-hexa```
+Installation commands:
+
+   * apt-get update
+   * apt-get install g++ cmake git
+   * apt-get install libqt5opengl5-dev libqt5svg5-dev qtbase5-dev
+   * apt-get install libboost-dev libboost-program-options-dev libboost-system-dev libboost-thread-dev
+   * apt-get install libgmp-dev libmpfr-dev zlib1g-dev
+   * apt-get install libtet1.5 qtscript5-dev
+   * to solve a missing link (bug in docker image?)
+       ln -s /usr/lib/x86_64-linux-gnu/libtet.so.1.5 /usr/lib/x86_64-linux-gnu/libtet.so
+   * git clone https://github.com/CGAL/cgal.git
+   * cd cgal
+   * git checkout 2b547ec58a9e34458792cb3f09ead399bb6dd075
+      (cgal master, May 17th 2022)
+   * cd ..
+   * git clone https://gitlab.liris.cnrs.fr/gdamiand/3d-query-replace.git
+   * cd 3d-query-replace/
+   
+# 3. Compile the Two Programs ```hexa-subdivision``` and ```tetra-to-hexa```
 
    *// We suppose the current directory is SRC_DIR*
    ```
@@ -21,13 +49,14 @@ Let us denote by SRC_DIR the root directory of the gitlab repository.
    cd builds
    mkdir release
    cd release
-   cmake -DCMAKE_BUILD_TYPE=Release -DCGAL_DIR=/cgal/directory/ ../../src
+   cmake -DCMAKE_BUILD_TYPE=Release ../../src -DCGAL_DIR=../../../cgal/
    make
    ```
 
    Replace ```/cgal/directory``` by the full path to the directory containing CGAL.
 
-# 3. Run the Programs
+
+# 4. Run the Programs
 
    One example of run:
 
@@ -42,13 +71,13 @@ Let us denote by SRC_DIR the root directory of the gitlab repository.
 
    Run ```./hexa-subdivision -h``` (or ```./tetra-to-hexa -h```) for an help showing all options. Press the ```h``` key to view the help of the interactive viewer.
 
-# 4. Reproduce the Experiments of the Paper
+# 5. Reproduce the Experiments of the Paper
 
    *// We suppose the current directory is SRC_DIR/builds/release*
    
    The experiments given in the paper are obtained by the following runs (for each run, use -draw option to view the final mesh):
 
-   # 4.1 Hexahedral subdivision
+   # 5.1 Hexahedral subdivision
 
    ```
    ./hexa-subdivision ../../data/mesh1.off -lmax 7
@@ -56,7 +85,7 @@ Let us denote by SRC_DIR the root directory of the gitlab repository.
    ./hexa-subdivision ../../data/mesh3.off -lmax 7
    ```
 
-   # 4.2 Marching-cube
+   # 5.2 Marching-cube
 
    ```
    ./hexa-subdivision ../../data/mesh1.off -lmax 7 -marching-cubes
@@ -64,7 +93,7 @@ Let us denote by SRC_DIR the root directory of the gitlab repository.
    ./hexa-subdivision ../../data/mesh3.off -lmax 7 -marching-cubes
    ```
 
-   # 4.3 Conformal Mesh
+   # 5.3 Conformal Mesh
 
    ```
    ./hexa-subdivision ../../data/mesh1.off -lmax 7 -create-transitions
@@ -80,7 +109,7 @@ Let us denote by SRC_DIR the root directory of the gitlab repository.
    ./hexa-subdivision ../../data/mesh3.off -lmax 7 -create-transitions -no-signature
    ```
 
-   # 4.4 Mesh Transformation
+   # 5.4 Mesh Transformation
 
    Require [TetGen](https://wias-berlin.de/software/index.jsp?id=TetGen&lang=1)