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Schneider Leo authoreddc85d9ea
diann_processing.py 365 B
import pandas as pd
spec_lib = pd.read_parquet('database/CIT_BASE_UP000584719_546.parquet')
lib_rt = spec_lib[['Stripped.Sequence','RT']]
df = lib_rt.groupby(['Stripped.Sequence'])['RT'].mean().to_frame().reset_index()
df.rename(columns = {'Stripped.Sequence':'Sequence', 'RT':'Retention time'}, inplace = True)
df.to_csv('database/CIT_BASE_UP000584719_546.csv')