Started added workflow rewrite

src/main.py

@@ -48,6 +48,49 @@ class Main(Nextflow_Building_Blocks):
         dico = {}
         self.root.get_all_calls_in_subworkflow(calls = dico)
         return list(dico.keys())
+    
+    def get_all_executors_in_subworkflow(self):
+        dico = {}
+        self.root.get_all_executors_in_subworkflow(calls = dico)
+        return list(dico.keys())
+
+
+    #TODO -> write tests to test this method
+    def get_all_calls_in_workflow(self):
+        all_calls = self.get_all_calls_in_subworkflow()
+        dico = {}
+        for c in all_calls:
+            sub = c.get_first_element_called()
+            if(sub.get_type()=="Subworkflow"):
+                if(c not in dico):
+                    sub_calls = sub.get_all_calls_in_workflow()
+                    for sub_c in sub_calls:
+                        dico[sub_c] = ""
+        for c in all_calls:
+            dico[c] = ""
+
+        return list(dico.keys())
+    
+    #TODO -> write tests to test this method 
+    def get_all_executors_in_workflow(self):
+        all_executors = self.get_all_executors_in_subworkflow()
+        dico = {}
+        for e in all_executors:
+            if(e.get_type()=="Call"):
+                for c in e.get_all_calls():
+                    sub = c.get_first_element_called()
+                    if(sub.get_type()=="Subworkflow"):
+                        if(c not in dico):
+                            sub_calls = sub.get_all_executors_in_workflow()
+                            for sub_c in sub_calls:
+                                dico[sub_c] = ""
+            #Case it's an operation
+            else:
+                dico[e] = ""
+        for e in all_executors:
+            dico[e] = ""
+
+        return list(dico.keys())
 
     
     def check_includes(self):

src/root.py

@@ -220,7 +220,13 @@ class Root(Nextflow_Building_Blocks):
                 calls[c] = ''
                 #if(c.get_first_element_called().get_type()=="Subworkflow"):
                 #    c.get_first_element_called().root.get_all_calls(calls = calls)
-        
+    
+
+    def get_all_executors_in_subworkflow(self, calls = {}):
+        all_executors = self.get_executors_same_level()+self.get_inside_executors()
+        for e in all_executors:
+            calls[e] = ''
+    
 
     #############
     # PROCESSES